Factsheet for Bra002805.1-P

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plastid, nucleus

Predictor Summary:

nucleus 2
vacuole 1
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY64970	Canola	extracellular, plasma membrane, vacuole	98.17	96.02
AT5G56590.1	Thale cress	extracellular, plasma membrane, vacuole	89.02	86.56
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	70.94	70.65
KRH41480	Soybean	extracellular, plasma membrane, vacuole	70.94	70.08
KRH60198	Soybean	extracellular, plasma membrane, vacuole	70.53	69.54
Solyc12g008580.1.1	Tomato	extracellular	69.72	69.15
PGSC0003DMT400000943	Potato	extracellular, vacuole	69.31	68.75
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	61.18	65.72
Os01t0739700-01	Rice	plasma membrane	63.82	63.69
TraesCS3A01G277100.2	Wheat	vacuole	63.82	63.56
EES01451	Sorghum	extracellular, plasma membrane, vacuole	63.21	62.58
Zm00001d043524_P001	Maize	plasma membrane	63.01	62.5
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	54.47	62.18
TraesCS3B01G311300.2	Wheat	vacuole	64.23	59.51
TraesCS3D01G277300.4	Wheat	vacuole	64.02	59.43
HORVU3Hr1G070440.12	Barley	plastid	61.59	58.27
Bra010330.1-P	Field mustard	cytosol	59.15	55.64
Bra011100.1-P	Field mustard	extracellular, plasma membrane, vacuole	54.67	53.59
Bra035561.1-P	Field mustard	extracellular, vacuole	35.98	38.48
Bra032357.1-P	Field mustard	extracellular, vacuole	29.27	38.1
Bra026644.1-P	Field mustard	extracellular	38.21	37.83
Bra010800.1-P	Field mustard	vacuole	28.86	37.17
Bra002927.1-P	Field mustard	extracellular, vacuole	34.96	37.15
Bra015166.1-P	Field mustard	extracellular, vacuole	35.57	37.0
Bra021137.1-P	Field mustard	plasma membrane	28.25	36.01
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	27.64	35.98
Bra039757.1-P	Field mustard	extracellular, vacuole	36.79	35.84
Bra000508.1-P	Field mustard	extracellular, vacuole	28.05	35.38
Bra023293.1-P	Field mustard	extracellular	29.67	35.27
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	35.77	35.13
Bra012604.1-P	Field mustard	vacuole	28.25	35.01
Bra029639.1-P	Field mustard	vacuole	32.72	35.0
Bra039852.1-P	Field mustard	vacuole	33.13	34.98
Bra013297.1-P	Field mustard	vacuole	28.46	34.91
Bra003212.1-P	Field mustard	extracellular	31.71	34.74
Bra007161.1-P	Field mustard	extracellular	31.71	34.44
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	34.35	34.28
Bra007162.1-P	Field mustard	extracellular	31.3	34.22
Bra014747.1-P	Field mustard	extracellular	31.3	34.15
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	34.96	33.99
Bra005028.1-P	Field mustard	extracellular	30.89	33.93
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	30.89	33.85
Bra012015.1-P	Field mustard	plasma membrane, vacuole	28.46	33.57
Bra001918.1-P	Field mustard	extracellular, vacuole	32.32	33.12
Bra033641.1-P	Field mustard	extracellular, vacuole	28.66	32.64
Bra014979.1-P	Field mustard	extracellular, vacuole	31.5	32.43
Bra016812.1-P	Field mustard	extracellular	33.94	32.18
Bra028343.1-P	Field mustard	extracellular, vacuole	30.89	31.93
Bra037057.1-P	Field mustard	extracellular, vacuole	30.89	31.73
Bra017659.1-P	Field mustard	vacuole	35.37	31.41
Bra032758.1-P	Field mustard	vacuole	30.28	31.04
Bra028526.1-P	Field mustard	extracellular, vacuole	26.42	30.23
Bra028988.1-P	Field mustard	extracellular, vacuole	34.96	29.91
Bra038969.1-P	Field mustard	extracellular, vacuole	30.28	29.5
Bra001245.1-P	Field mustard	vacuole	33.54	29.15
Bra027207.1-P	Field mustard	plastid	23.37	21.78

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EnsemblPlantsGene:Bra002805	EnsemblPlants:Bra002805.1	EnsemblPlants:Bra002805.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0009505	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	GO:GO:0030312	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
UniProt:M4CF23	PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF88
SMART:SM00768	SUPFAM:SSF51445	UniParc:UPI0002544A2B	InterPro:X8	SEG:seg	:

Description

AT5G56590 (E=6e-218) | glycosyl hydrolase family 17 protein

Coordinates

chrA10:+:7480444..7482165

Molecular Weight (calculated)

53701.1 Da

IEP (calculated)

7.306

GRAVY (calculated)

-0.256

Length

492 amino acids

Sequence
(BLAST)

001: MHNCNGCYGG KVGVCYGRSA DDLPTPAKVV QLIKQHNIKY VRIYDSNSQV LKAFANTTIE LMIGVPNSDL KPFSQFQSNA DTWLKNSVLP YYPTTKITYI
101: TVGAESTDDP HTNASSLVVP AMQNVLTALK KVGLSRRIKV STTLSLGVLS RSFPPSAGAF NSSYAYFLRP MLEFLAENQS PFMVDLYPYY AYRDSPNNVS
201: LDYVLFESSS EVIDPNTGLL YKNMFDAQVD ALYYALTALN FRTIKIMVTE TGWPTKGSPK EKGAASPDNA ETYNSNIVRH TVTNQGTPSK PGEAMDVYIF
301: SLFNENRKTG LDSERNWGLF YPDQTSVYQL DFTGKNGGFR SNSSGGNSRG RSESWCIASS KASEIELRGA LDWACGPGNV DCTAIQPSQP CFQPDTLVSH
401: ASFVFNSYFQ QNGGTDVACS FGGVGVKVNK DPSYDKCVYI TAGGNNTKAT NASALNSSAS TSRGNESLVW NLSLCLVILL LFSLQTTNSQ AL

Best Arabidopsis Sequence Match ( AT5G56590.1 )
(BLAST)

001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.