Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES01451 | Sorghum | extracellular, plasma membrane, vacuole | 96.57 | 96.38 |
| Os01t0739700-01 | Rice | plasma membrane | 88.51 | 89.05 |
| HORVU3Hr1G070400.1 | Barley | extracellular, vacuole | 79.44 | 86.03 |
| TraesCS3A01G277100.2 | Wheat | vacuole | 84.88 | 85.22 |
| TraesCS3D01G277300.4 | Wheat | vacuole | 85.08 | 79.62 |
| TraesCS3B01G311300.2 | Wheat | vacuole | 84.88 | 79.28 |
| HORVU3Hr1G070440.12 | Barley | plastid | 81.05 | 77.31 |
| GSMUA_Achr4P02650_001 | Banana | extracellular, vacuole | 65.52 | 75.41 |
| KRH41480 | Soybean | extracellular, plasma membrane, vacuole | 70.36 | 70.08 |
| VIT_11s0016g02960.t01 | Wine grape | extracellular, vacuole | 69.56 | 69.84 |
| KRH60198 | Soybean | extracellular, plasma membrane, vacuole | 69.76 | 69.34 |
| Solyc12g008580.1.1 | Tomato | extracellular | 67.74 | 67.74 |
| PGSC0003DMT400000943 | Potato | extracellular, vacuole | 67.34 | 67.34 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 64.52 | 63.24 |
| CDY64970 | Canola | extracellular, plasma membrane, vacuole | 64.11 | 63.22 |
| Bra002805.1-P | Field mustard | nucleus, plastid, vacuole | 62.5 | 63.01 |
| CDY32869 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 63.71 | 62.82 |
| Zm00001d001791_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 36.49 | 40.22 |
| Zm00001d048055_P001 | Maize | plasma membrane | 39.52 | 39.12 |
| Zm00001d028243_P001 | Maize | plasma membrane | 38.91 | 38.45 |
| Zm00001d018214_P001 | Maize | extracellular | 37.5 | 38.11 |
| Zm00001d028410_P001 | Maize | vacuole | 27.62 | 37.95 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 36.9 | 37.2 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 36.69 | 36.4 |
| Zm00001d013573_P001 | Maize | extracellular, plasma membrane, vacuole | 33.87 | 36.29 |
| Zm00001d042767_P001 | Maize | plasma membrane | 30.24 | 36.23 |
| Zm00001d030361_P001 | Maize | plasma membrane | 29.44 | 36.14 |
| Zm00001d046534_P001 | Maize | plasma membrane | 28.63 | 36.04 |
| Zm00001d031571_P001 | Maize | extracellular | 34.68 | 35.68 |
| Zm00001d004768_P001 | Maize | extracellular | 32.66 | 35.68 |
| Zm00001d046134_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 29.23 | 35.63 |
| Zm00001d036051_P001 | Maize | extracellular, vacuole | 30.24 | 35.21 |
| Zm00001d003784_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 27.82 | 34.94 |
| Zm00001d012292_P001 | Maize | mitochondrion | 29.84 | 34.74 |
| Zm00001d015783_P001 | Maize | golgi, plasma membrane, vacuole | 29.23 | 34.69 |
| Zm00001d000117_P001 | Maize | plastid, vacuole | 27.42 | 34.26 |
| Zm00001d021024_P001 | Maize | extracellular | 32.86 | 34.03 |
| Zm00001d010137_P001 | Maize | extracellular | 27.62 | 33.83 |
| Zm00001d021690_P001 | Maize | extracellular | 36.49 | 30.99 |
| Zm00001d004763_P001 | Maize | extracellular | 28.83 | 30.3 |
| Zm00001d013390_P001 | Maize | extracellular | 26.81 | 30.09 |
| Zm00001d019248_P001 | Maize | extracellular, vacuole | 29.84 | 29.72 |
| Zm00001d028331_P001 | Maize | plastid | 29.23 | 27.88 |
| Zm00001d006538_P001 | Maize | vacuole | 35.48 | 27.12 |
| Zm00001d021598_P005 | Maize | plasma membrane | 35.89 | 27.05 |
| Zm00001d021695_P001 | Maize | extracellular | 34.48 | 26.43 |
| Zm00001d021697_P001 | Maize | extracellular | 34.88 | 24.89 |
Protein Annotations
| KEGG:00500+3.2.1.39 | EntrezGene:100278152 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EMBL:BT063368 | UniProt:C0P4Z9 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005575 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009505 | GO:GO:0016020 |
| GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030312 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| ProteinID:ONM38366.1 | PFAM:PF00332 | PFAM:PF07983 | ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF88 |
| SMART:SM00768 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI0001948D31 | InterPro:X8 | EnsemblPlantsGene:Zm00001d043524 |
| EnsemblPlants:Zm00001d043524_P001 | EnsemblPlants:Zm00001d043524_T001 | SEG:seg | : | : | : |
Description
Glucan endo-13-beta-glucosidase 13
Coordinates
chr3:-:202714092..202717654
Molecular Weight (calculated)
53992.3 Da
IEP (calculated)
5.668
GRAVY (calculated)
-0.029
Length
496 amino acids
Sequence
(BLAST)
(BLAST)
001: MARRLMLALP VLLFLLLVGQ CHGGKIGVCY GRNADDLPAP DKVAQLIQQQ SIKYVRIYDT NIDVIKAFAN TGVELMVGVP NSDLLAFAQY QSNVDTWLKN
101: SILPYYPDTM ITYITVGAEV TESPTNVSAL VVPAMRNVHT ALKKAGLHKK ITISSTHSLG ILSRSFPPSA GAFNSSYAYF LKPMLQFLVE NQAPFMVDLY
201: PYYAYQNSRS NVSLNYALFS PESQDVIDPN TGLVYTNMFD AQVDSIFFAL MALNFKTLKI MITESGWPNK GAVKETGATP DNAQTYNTNL IRHVVNDSGT
301: PAKPGEEIDV YIFSLFNENR KPGIESERNW GLFFPDKSSI YSLDWTGRGN VDVMTGANIT SANGTWCIAS TNASETDLQN ALNWACGPGN VDCSAIQPSQ
401: PCYQPDTLAS HASYAFNSYY QQNGANVVAC DFGGAGIRTT KDPSYDTCVY LAAGNKMSTT NSTSLPARSD SGPVPCAKCF ATLLPMLAIV MAAVMV
101: SILPYYPDTM ITYITVGAEV TESPTNVSAL VVPAMRNVHT ALKKAGLHKK ITISSTHSLG ILSRSFPPSA GAFNSSYAYF LKPMLQFLVE NQAPFMVDLY
201: PYYAYQNSRS NVSLNYALFS PESQDVIDPN TGLVYTNMFD AQVDSIFFAL MALNFKTLKI MITESGWPNK GAVKETGATP DNAQTYNTNL IRHVVNDSGT
301: PAKPGEEIDV YIFSLFNENR KPGIESERNW GLFFPDKSSI YSLDWTGRGN VDVMTGANIT SANGTWCIAS TNASETDLQN ALNWACGPGN VDCSAIQPSQ
401: PCYQPDTLAS HASYAFNSYY QQNGANVVAC DFGGAGIRTT KDPSYDTCVY LAAGNKMSTT NSTSLPARSD SGPVPCAKCF ATLLPMLAIV MAAVMV
001: MARDFKLIFS ISILLLLLDC CYGGKVGVCY GRSADDLPTP SKVVQLIQQH NIKYVRIYDY NSQVLKAFGN TSIELMIGVP NSDLNAFSQS QSNVDTWLKN
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL
101: SVLPYYPTTK ITYITVGAES TDDPHINASS FVVPAMQNVL TALRKVGLSR RIKVSTTLSL GILSRSFPPS AGAFNSSYAY FLRPMLEFLA ENKSPFMIDL
201: YPYYAYRDSP NNVSLDYVLF ESSSEVIDPN TGLLYKNMFD AQVDALYYAL TALNFRTIKI MVTETGWPTK GSPKEKAAAS SDNAETYNSN IIRHVVTNQG
301: TPAKPGEAMN VYIFSLFNEN RKAGLDSERN WGLFYPDQTS VYQLDFTGKS NGFHSNSSGT NSSGSSNSWC IASSKASERD LKGALDWACG PGNVDCTAIQ
401: PSQPCFQPDT LVSHASFVFN SYFQQNRATD VACSFGGAGV KVNKDPSYDK CIYITAGGNK TKATNATALT SSASTPRGNE LLQWILKLCL MISLFFSLQT
501: MNSQAL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 13 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJU9]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.