Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
plasma membrane: 27341663 |
msms PMID:
27297264
doi
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
msms PMID:
27341663
doi
Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95256 | Sorghum | extracellular, plasma membrane, vacuole | 96.81 | 96.61 |
| Zm00001d028243_P001 | Maize | plasma membrane | 96.01 | 95.82 |
| Os03t0221500-01 | Rice | extracellular, plasma membrane, vacuole | 93.01 | 92.46 |
| TraesCS4D01G241900.1 | Wheat | extracellular | 87.82 | 88.0 |
| TraesCS4B01G242300.1 | Wheat | extracellular | 87.62 | 87.8 |
| TraesCS4A01G064900.2 | Wheat | extracellular, plasma membrane, vacuole | 88.02 | 83.52 |
| HORVU4Hr1G067180.3 | Barley | extracellular, vacuole | 80.84 | 80.36 |
| VIT_01s0011g05500.t01 | Wine grape | extracellular, plasma membrane, vacuole | 72.26 | 72.69 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 73.85 | 71.29 |
| Solyc04g007910.2.1 | Tomato | extracellular | 68.66 | 68.12 |
| VIT_14s0006g00520.t01 | Wine grape | extracellular, plasma membrane, vacuole | 67.07 | 68.02 |
| KRH41666 | Soybean | plasma membrane | 67.66 | 67.94 |
| KRH70129 | Soybean | cytosol | 66.07 | 67.55 |
| PGSC0003DMT400075818 | Potato | extracellular | 68.06 | 67.52 |
| KRH17336 | Soybean | plasma membrane | 66.47 | 66.87 |
| KRH08471 | Soybean | extracellular | 65.87 | 66.53 |
| CDY09427 | Canola | extracellular | 65.47 | 66.0 |
| Bra026644.1-P | Field mustard | extracellular | 65.47 | 66.0 |
| CDY48807 | Canola | extracellular | 65.47 | 66.0 |
| KRH72984 | Soybean | vacuole | 65.47 | 64.95 |
| AT2G01630.1 | Thale cress | extracellular | 64.67 | 64.67 |
| KRH30935 | Soybean | extracellular, plasma membrane, vacuole | 64.07 | 64.46 |
| CDY16440 | Canola | extracellular | 64.67 | 64.29 |
| KRG97940 | Soybean | extracellular, plasma membrane, vacuole | 63.87 | 64.26 |
| Bra039757.1-P | Field mustard | extracellular, vacuole | 64.47 | 63.96 |
| CDY58676 | Canola | extracellular, vacuole | 64.27 | 63.89 |
| AT1G66250.1 | Thale cress | vacuole | 62.87 | 62.38 |
| Solyc08g005000.2.1 | Tomato | extracellular | 53.69 | 61.42 |
| KRH60366 | Soybean | extracellular | 68.06 | 59.1 |
| GSMUA_Achr2P21600_001 | Banana | mitochondrion, nucleus, plasma membrane | 75.85 | 55.23 |
| PGSC0003DMT400040463 | Potato | mitochondrion, vacuole | 59.48 | 52.74 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 44.91 | 45.73 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 44.71 | 44.8 |
| Zm00001d043524_P001 | Maize | plasma membrane | 39.12 | 39.52 |
| Zm00001d021598_P005 | Maize | plasma membrane | 49.9 | 37.99 |
| Zm00001d018214_P001 | Maize | extracellular | 36.73 | 37.7 |
| Zm00001d013573_P001 | Maize | extracellular, plasma membrane, vacuole | 34.53 | 37.37 |
| Zm00001d001791_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 33.53 | 37.33 |
| Zm00001d004768_P001 | Maize | extracellular | 31.34 | 34.58 |
| Zm00001d042767_P001 | Maize | plasma membrane | 28.54 | 34.54 |
| Zm00001d010137_P001 | Maize | extracellular | 27.74 | 34.32 |
| Zm00001d031571_P001 | Maize | extracellular | 32.73 | 34.02 |
| Zm00001d028410_P001 | Maize | vacuole | 24.15 | 33.52 |
| Zm00001d012292_P001 | Maize | mitochondrion | 28.14 | 33.1 |
| Zm00001d000117_P001 | Maize | plastid, vacuole | 26.15 | 33.0 |
| Zm00001d036051_P001 | Maize | extracellular, vacuole | 27.94 | 32.86 |
| Zm00001d030361_P001 | Maize | plasma membrane | 26.35 | 32.67 |
| Zm00001d021024_P001 | Maize | extracellular | 31.14 | 32.57 |
| Zm00001d046534_P001 | Maize | plasma membrane | 25.55 | 32.49 |
| Zm00001d046134_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 26.35 | 32.43 |
| Zm00001d004763_P001 | Maize | extracellular | 30.34 | 32.2 |
| Zm00001d003784_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 25.15 | 31.9 |
| Zm00001d015783_P001 | Maize | golgi, plasma membrane, vacuole | 26.55 | 31.82 |
| Zm00001d013390_P001 | Maize | extracellular | 26.55 | 30.09 |
| Zm00001d021690_P001 | Maize | extracellular | 34.93 | 29.97 |
| Zm00001d019248_P001 | Maize | extracellular, vacuole | 27.35 | 27.51 |
| Zm00001d028331_P001 | Maize | plastid | 27.94 | 26.92 |
| Zm00001d006538_P001 | Maize | vacuole | 33.33 | 25.73 |
| Zm00001d021695_P001 | Maize | extracellular | 32.14 | 24.88 |
| Zm00001d021697_P001 | Maize | extracellular | 32.53 | 23.45 |
Protein Annotations
| KEGG:00500+3.2.1.39 | EntrezGene:100283770 | Gene3D:3.20.20.80 | MapMan:50.3.2 | ProteinID:AQL08590.1 | EMBL:BT064774 |
| EMBL:BT065723 | EMBL:BT085857 | UniProt:C0P905 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| PFAM:PF00332 | PFAM:PF07983 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF147 | SMART:SM00768 | SUPFAM:SSF51445 |
| SignalP:SignalP-noTM | UniParc:UPI000194B273 | InterPro:X8 | EnsemblPlantsGene:Zm00001d048055 | EnsemblPlants:Zm00001d048055_P001 | EnsemblPlants:Zm00001d048055_T001 |
| SEG:seg | : | : | : | : | : |
Description
Glucan endo-13-beta-glucosidase 3
Coordinates
chr9:-:149059512..149063313
Molecular Weight (calculated)
53688.9 Da
IEP (calculated)
5.689
GRAVY (calculated)
0.092
Length
501 amino acids
Sequence
(BLAST)
(BLAST)
001: MRKLFFVYFV LLLAAAVVHG EDGAYIGVNI GTAMSSVPAP TQITTLLRSQ NIRHVRLYDA DPAMLAALSN TGIRVIVSVP NEQLLAIGNS NATAANWVAR
101: NVAAHFPAVN ITAIAVGSEV LSAQPNAAPL LMPAMRYLQN ALVAAALDRY IKISTPHSSS IILDSFPPSQ AFFNRSLDSV LVPMLKFLQS TGSPLMLNVY
201: PYYDYMRSNG VIPLDYALFR PLPANKEAVD ANTLLHYTNV FDAVVDAAYF AMAYLNVTNV PVMVTETGWP HKGDPSSEPD ATSDNADTYN SNLIRHVMNS
301: TGTPKHPRVA VPTYIYELYD EDTRPGSTSE KYWGLFDMNG VPAYTLHLTG SGVLLANDTT NQTYCVAREG ADPKMLQAAL DWACGPGKVD CSVLMQGQPC
401: YDPDTVEAHA TYAFNAYYHG MGMGSGTCYF SGVAVVTTTD PSHGSCVYGG KNGTSLMNGT SLAPSSNSTE GGSGAHREFG DVSSLVRIVS AALLFSALLL
501: L
101: NVAAHFPAVN ITAIAVGSEV LSAQPNAAPL LMPAMRYLQN ALVAAALDRY IKISTPHSSS IILDSFPPSQ AFFNRSLDSV LVPMLKFLQS TGSPLMLNVY
201: PYYDYMRSNG VIPLDYALFR PLPANKEAVD ANTLLHYTNV FDAVVDAAYF AMAYLNVTNV PVMVTETGWP HKGDPSSEPD ATSDNADTYN SNLIRHVMNS
301: TGTPKHPRVA VPTYIYELYD EDTRPGSTSE KYWGLFDMNG VPAYTLHLTG SGVLLANDTT NQTYCVAREG ADPKMLQAAL DWACGPGKVD CSVLMQGQPC
401: YDPDTVEAHA TYAFNAYYHG MGMGSGTCYF SGVAVVTTTD PSHGSCVYGG KNGTSLMNGT SLAPSSNSTE GGSGAHREFG DVSSLVRIVS AALLFSALLL
501: L
001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU91]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.