Factsheet for TraesCS4A01G064900.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G241900.1	Wheat	extracellular	93.37	98.6
TraesCS4B01G242300.1	Wheat	extracellular	92.99	98.2
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	86.55	90.67
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	85.61	89.68
EER95256	Sorghum	extracellular, plasma membrane, vacuole	84.09	88.45
Zm00001d048055_P001	Maize	plasma membrane	83.52	88.02
Zm00001d028243_P001	Maize	plasma membrane	83.33	87.65
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	66.86	70.88
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	69.13	70.33
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	62.88	67.21
KRH41666	Soybean	plasma membrane	63.45	67.13
Solyc04g007910.2.1	Tomato	extracellular	64.02	66.93
PGSC0003DMT400075818	Potato	extracellular	63.83	66.73
KRH70129	Soybean	cytosol	61.36	66.12
KRH17336	Soybean	plasma membrane	62.31	66.06
KRH08471	Soybean	extracellular	61.74	65.73
KRH30935	Soybean	extracellular, plasma membrane, vacuole	61.17	64.86
CDY48807	Canola	extracellular	60.98	64.79
CDY09427	Canola	extracellular	60.98	64.79
Bra026644.1-P	Field mustard	extracellular	60.98	64.79
CDY16440	Canola	extracellular	61.36	64.29
KRH72984	Soybean	vacuole	61.17	63.96
Bra039757.1-P	Field mustard	extracellular, vacuole	61.17	63.96
KRG97940	Soybean	extracellular, plasma membrane, vacuole	60.23	63.86
CDY58676	Canola	extracellular, vacuole	60.8	63.69
AT1G66250.1	Thale cress	vacuole	60.8	63.56
AT2G01630.1	Thale cress	extracellular	60.04	63.27
Solyc08g005000.2.1	Tomato	extracellular	49.24	59.36
KRH60366	Soybean	extracellular	63.45	58.06
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	70.45	54.07
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	54.92	51.33
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	46.97	46.62
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	43.18	46.25
TraesCS5A01G155600.1	Wheat	plasma membrane	42.05	44.67
TraesCS3A01G277100.2	Wheat	vacuole	35.8	38.26
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	33.33	37.85
TraesCS2A01G439500.1	Wheat	extracellular	32.01	36.74
TraesCS4A01G293500.1	Wheat	plasma membrane	32.39	36.54
TraesCS7A01G256800.1	Wheat	vacuole	31.63	33.81
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	25.76	33.33
TraesCS3A01G249500.1	Wheat	vacuole	24.81	33.25
TraesCS1A01G055900.1	Wheat	extracellular	18.18	33.22
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	30.87	33.06
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	24.81	32.35
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	26.14	32.17
TraesCS2A01G294700.1	Wheat	plasma membrane	23.67	32.05
TraesCS5A01G329700.1	Wheat	vacuole	23.67	31.81
TraesCS1A01G276200.1	Wheat	vacuole	24.62	31.71
TraesCS1A01G049800.1	Wheat	extracellular, vacuole	24.24	31.53
TraesCS4A01G175900.1	Wheat	extracellular	27.46	31.45
TraesCS4A01G067900.1	Wheat	vacuole	24.81	31.34
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	24.62	31.1
TraesCS4A01G077800.1	Wheat	vacuole	25.38	30.8
TraesCS5A01G390600.1	Wheat	extracellular	28.03	29.96
TraesCS7A01G378100.1	Wheat	golgi, vacuole	22.54	29.82
TraesCS6A01G164100.1	Wheat	plastid	23.67	28.54
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	30.11	28.49
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	19.13	27.82
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	28.41	27.22
TraesCS1A01G422500.1	Wheat	vacuole	28.79	26.67
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	24.24	26.56

Protein Annotations

EnsemblPlants:TraesCS4A01G064900.2	EnsemblPlantsGene:TraesCS4A01G064900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
InterPro:X8	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF147	PFAM:PF00332	PFAM:PF07983
SEG:seg	SignalP:SignalP-noTM	SMART:SM00768	SUPFAM:SSF51445	MapMan:50.3.2	:

Description

No Description!

Coordinates

chr4A:-:62219435..62222760

Molecular Weight (calculated)

56465.6 Da

IEP (calculated)

5.818

GRAVY (calculated)

0.187

Length

528 amino acids

Sequence
(BLAST)

001: MAKLHFFLLL LLAAAEAIHG EDGAYIGVNI GTAMSSVPAA TQITTLLRSQ NIRHIRLYDA DPGMLSALAN TGIRVIISVP NEQLLAIGNS NATAAKWVAR
101: NVAAHYPSVN ITAIAVGSEV LSTLPNAAPL IMPAMRYLQN ALVAAALDKY IKISTPHSSS IILDSFPPSQ AFFNRSLDPV LVPMLKFLQS TGAPLMLNVY
201: PYYDYMRSNG VIPLDYALFR PLPPNKEAVD ANTLLHYTNV FDAVVDAAYF AMAYLNVTNV PVMVTETGWP HKGDASAEPD ANNDNADTYN SNLIRHVMNV
301: TGTPKHPGVA VPTFIYELYD EDTRPGTASE KYWGLFDMNG IPAYALHLTG SGVLLANDTT NQTYCVAREG ADEKMLQAAL DWACGPGKVD CSVLAQGKPC
401: YDPDTVEDHA TYAFNAYYHG MGMGSGTCYF SGVAVITTTD PSKLHSLLFL ACSFAFLGLM PWEHLFACAG HGSCVYGGKN GSALLNGTSL APSSNSTADS
501: GSRRAVGDVT SFVRIVVTAL LLSVVALL

Best Arabidopsis Sequence Match ( AT2G01630.1 )
(BLAST)

001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU91]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.