Factsheet for TraesCS4A01G293500.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 6
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G020100.1	Wheat	extracellular	94.23	95.25
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	91.24	90.66
Os03t0669300-02	Rice	endoplasmic reticulum	82.05	82.76
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	80.13	78.95
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	77.99	78.83
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	89.32	77.99
GSMUA_Achr7P08120_001	Banana	plastid	45.3	65.84
GSMUA_Achr7P26810_001	Banana	plastid	38.25	60.47
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	57.05	58.17
KRH24481	Soybean	cytosol	44.66	58.06
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	56.2	57.3
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	56.2	56.56
PGSC0003DMT400001908	Potato	extracellular	56.2	55.96
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	58.33	55.71
Solyc01g109570.2.1	Tomato	extracellular	56.2	55.6
KRH15221	Soybean	extracellular	55.77	53.93
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	47.86	53.59
CDX75437	Canola	extracellular, plasma membrane, vacuole	57.48	53.16
CDX69064	Canola	extracellular, plasma membrane, vacuole	57.05	52.87
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	56.84	52.78
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	57.05	52.77
TraesCS4A01G077800.1	Wheat	vacuole	48.72	52.41
Bra039852.1-P	Field mustard	vacuole	51.92	52.15
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	50.64	51.86
Solyc04g080260.2.1	Tomato	extracellular	48.08	51.02
PGSC0003DMT400013154	Potato	extracellular, vacuole	47.65	50.57
AT2G16230.1	Thale cress	vacuole	53.21	49.5
Bra033641.1-P	Field mustard	extracellular, vacuole	45.51	49.31
CDY22386	Canola	extracellular, vacuole	45.3	49.07
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	45.73	48.86
Bra017659.1-P	Field mustard	vacuole	57.48	48.56
CDX71547	Canola	extracellular, vacuole	45.09	48.39
CDY37244	Canola	vacuole	52.78	48.24
CDY26761	Canola	vacuole	52.35	47.85
TraesCS4A01G175900.1	Wheat	extracellular	41.45	42.08
TraesCS2A01G439500.1	Wheat	extracellular	41.03	41.74
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	40.81	41.08
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	36.97	40.33
TraesCS3A01G249500.1	Wheat	vacuole	33.76	40.1
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	33.97	39.26
TraesCS2A01G294700.1	Wheat	plasma membrane	32.48	38.97
TraesCS1A01G055900.1	Wheat	extracellular	23.72	38.41
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	32.69	37.5
TraesCS5A01G329700.1	Wheat	vacuole	30.98	36.9
TraesCS1A01G049800.1	Wheat	extracellular, vacuole	31.62	36.45
TraesCS4A01G067900.1	Wheat	vacuole	32.48	36.36
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	37.61	35.7
TraesCS1A01G276200.1	Wheat	vacuole	31.2	35.61
TraesCS3A01G277100.2	Wheat	vacuole	37.18	35.22
TraesCS7A01G378100.1	Wheat	golgi, vacuole	29.7	34.84
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	26.5	34.16
TraesCS6A01G164100.1	Wheat	plastid	31.62	33.79
TraesCS7A01G256800.1	Wheat	vacuole	35.47	33.6
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	33.97	32.99
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	36.54	32.39
TraesCS5A01G390600.1	Wheat	extracellular	33.97	32.19
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	32.91	31.24
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	37.18	31.18
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	35.04	30.83
TraesCS5A01G155600.1	Wheat	plasma membrane	32.69	30.78
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	35.47	30.13
TraesCS1A01G422500.1	Wheat	vacuole	35.04	28.77

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF228	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS4A01G293500	EnsemblPlants:TraesCS4A01G293500.1	InterPro:X8	SEG:seg

Description

No Description!

Coordinates

chr4A:+:595417616..595419298

Molecular Weight (calculated)

47831.4 Da

IEP (calculated)

4.668

GRAVY (calculated)

0.105

Length

468 amino acids

Sequence
(BLAST)

001: MEAESRKLLL LAPVLLCCLV AISDAQSQHI GVNYGEVADN LPPPDATARL LKSTAITKLR LYGVDAGLIR ALAGTGVSLV LGVANGDIPA IAADPNAAAG
101: WLAANVLPFV PATAVSVVAV GNEVLESGDA ALAAALLPAM QNLRAAAVAA GDGAAAIKFS TVNTMAVLAQ SDPPSTGAFR PDAAAQLQGI LGFLSRTGAP
201: FMVNPYPYFA YQSDPRPDTL AFCLFRPNAG RLDAGSKITY TNMFDAQVDA VKSALGRAGY GAVDIVVAET GWPTKGDPTE QGATVDNARA YVSNLVAHLR
301: SGAGTPLMPG RPVDTYLFAL YDEDLKPGPA SERAFGLYHT DLTMAYDAGL TSSSSGGGGG STATTPTPTT PTPSKGSGGW CVASAGATDA QLQTDLDYAC
401: SQVGVDCGAI QPGGACFQPN TVRAHAAYAM NQLYQAAGSH PWNCDFRQSA TLTSTNPSYG SCVFTGGQ

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.