Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 5
- plastid 1
- vacuole 6
- plasma membrane 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra039852.1-P | Field mustard | vacuole | 77.73 | 83.91 |
| CDY37244 | Canola | vacuole | 83.5 | 82.03 |
| CDY26761 | Canola | vacuole | 82.31 | 80.86 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 73.36 | 73.21 |
| KRH24481 | Soybean | cytosol | 46.12 | 64.44 |
| KRH60849 | Soybean | endoplasmic reticulum, extracellular, vacuole | 57.85 | 63.4 |
| KRH51533 | Soybean | endoplasmic reticulum, extracellular, vacuole | 57.65 | 63.18 |
| PGSC0003DMT400001908 | Potato | extracellular | 58.05 | 62.13 |
| Solyc01g109570.2.1 | Tomato | extracellular | 57.85 | 61.52 |
| VIT_03s0063g02490.t01 | Wine grape | endoplasmic reticulum, extracellular | 59.64 | 61.22 |
| GSMUA_Achr7P08120_001 | Banana | plastid | 38.17 | 59.63 |
| GSMUA_Achr6P31650_001 | Banana | extracellular, vacuole | 51.49 | 56.43 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 47.91 | 55.02 |
| Os03t0669300-02 | Rice | endoplasmic reticulum | 50.7 | 54.96 |
| TraesCS4B01G020100.1 | Wheat | extracellular | 49.9 | 54.21 |
| GSMUA_Achr7P26810_001 | Banana | plastid | 31.81 | 54.05 |
| TraesCS4A01G293500.1 | Wheat | plasma membrane | 49.5 | 53.21 |
| Zm00001d013573_P001 | Maize | extracellular, plasma membrane, vacuole | 48.51 | 52.7 |
| TraesCS4D01G018300.1 | Wheat | plasma membrane, vacuole | 49.3 | 52.65 |
| KXG37872 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 49.5 | 52.42 |
| Os03t0227400-01 | Rice | plasma membrane | 36.98 | 50.96 |
| HORVU4Hr1G008950.1 | Barley | vacuole | 39.56 | 47.72 |
| GSMUA_Achr3P30520_001 | Banana | cytosol, plastid, vacuole | 42.35 | 46.61 |
| TraesCS4D01G053700.1 | Wheat | vacuole | 39.16 | 46.57 |
| TraesCS4B01G053700.2 | Wheat | vacuole | 38.57 | 46.41 |
| TraesCS4A01G260900.2 | Wheat | extracellular, plasma membrane, vacuole | 38.37 | 46.17 |
| HORVU4Hr1G003090.3 | Barley | extracellular, vacuole | 49.11 | 46.08 |
| HORVU4Hr1G065340.1 | Barley | extracellular, vacuole | 39.36 | 45.94 |
| TraesCS4D01G235000.1 | Wheat | plasma membrane, vacuole | 39.36 | 45.21 |
| EER95211 | Sorghum | extracellular, vacuole | 38.77 | 45.14 |
| TraesCS4A01G077800.1 | Wheat | vacuole | 38.97 | 45.06 |
| Os03t0722500-01 | Rice | extracellular, plasma membrane, vacuole | 39.16 | 43.97 |
| AT5G24318.1 | Thale cress | extracellular | 39.76 | 43.67 |
| EER93548 | Sorghum | vacuole | 38.57 | 43.6 |
| Zm00001d013390_P001 | Maize | extracellular | 38.17 | 43.44 |
| TraesCS4B01G233900.2 | Wheat | plasma membrane, plastid, vacuole | 38.97 | 42.52 |
| AT3G46570.1 | Thale cress | vacuole | 29.62 | 41.85 |
| AT3G55430.1 | Thale cress | extracellular | 36.18 | 40.53 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 33.6 | 39.67 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 31.01 | 39.1 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 36.58 | 38.98 |
| AT2G27500.1 | Thale cress | vacuole | 29.82 | 38.27 |
| AT1G30080.1 | Thale cress | vacuole | 31.01 | 38.24 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 34.59 | 37.91 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 34.59 | 37.42 |
| Zm00001d028331_P001 | Maize | plastid | 38.57 | 37.31 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 28.03 | 36.34 |
| AT4G18340.1 | Thale cress | vacuole | 28.63 | 36.27 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 29.62 | 35.06 |
| AT2G01630.1 | Thale cress | extracellular | 34.59 | 34.73 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 31.21 | 34.13 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 34.19 | 33.99 |
| AT3G13560.4 | Thale cress | plasma membrane | 34.0 | 33.86 |
| AT1G66250.1 | Thale cress | vacuole | 33.4 | 33.27 |
| AT3G23770.1 | Thale cress | extracellular | 31.21 | 32.98 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 33.2 | 32.68 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 35.39 | 32.42 |
| AT4G29360.2 | Thale cress | vacuole | 34.99 | 32.35 |
| AT4G14080.1 | Thale cress | vacuole | 29.82 | 31.38 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:816120 | ProteinID:AEC06477.1 | ArrayExpress:AT2G16230 |
| EnsemblPlantsGene:AT2G16230 | RefSeq:AT2G16230 | TAIR:AT2G16230 | RefSeq:AT2G16230-TAIR-G | EnsemblPlants:AT2G16230.1 | TAIR:AT2G16230.1 |
| Unigene:At.52765 | UniProt:F4IKB3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 |
| InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_179219.4 | PFAM:PF00332 | PFAM:PF07983 | PO:PO:0009005 |
| ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF228 | SMART:SM00768 | SUPFAM:SSF51445 | SignalP:SignalP-noTM |
| UniParc:UPI0001A7AEC0 | InterPro:X8 | SEG:seg | : | : | : |
Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IKB3]
Coordinates
chr2:-:7035378..7038395
Molecular Weight (calculated)
54149.5 Da
IEP (calculated)
4.564
GRAVY (calculated)
0.047
Length
503 amino acids
Sequence
(BLAST)
(BLAST)
001: MALSILFLLL FILFSISPSN AQSFIGVNYG LLSDNLPPPS QTAKLLQSTS IQKVRLYNAD SSIITSLVGT GIGIVIGVAN GDLPSIASDL NIASQWINSN
101: VLPFYPASNI ILINVGNEVL LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG LKGILQFLSD TGSPFAINPY
201: PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP
301: LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV
401: CFEPNNVASH TAYAMNLYFQ KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS SLYLARFIIS IYFFCLFPSL
501: RIM
101: VLPFYPASNI ILINVGNEVL LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG LKGILQFLSD TGSPFAINPY
201: PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP
301: LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV
401: CFEPNNVASH TAYAMNLYFQ KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS SLYLARFIIS IYFFCLFPSL
501: RIM
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.