Factsheet for AT1G11820.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, plasma membrane, endoplasmic reticulum

Predictor Summary:

extracellular 6
golgi 5
endoplasmic reticulum 6
plasma membrane 5
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21013	Canola	extracellular	88.65	87.28
Bra016812.1-P	Field mustard	extracellular	88.65	87.28
CDY31214	Canola	vacuole	88.06	86.21
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	74.76	72.9
KRH51109	Soybean	vacuole	74.17	72.47
GSMUA_Achr4P27760_001	Banana	cytosol, extracellular, vacuole	34.64	71.95
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	58.12	71.91
KRH02051	Soybean	mitochondrion, vacuole	74.56	69.78
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	75.93	68.43
KRH11452	Soybean	extracellular, vacuole	44.23	67.26
GSMUA_Achr2P13900_001	Banana	cytosol	58.12	59.76
GSMUA_Achr4P33420_001	Banana	vacuole	57.93	57.7
AT2G01630.1	Thale cress	extracellular	54.21	55.29
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	56.56	54.32
TraesCS2D01G230900.1	Wheat	plasma membrane	56.36	54.14
TraesCS2B01G274900.1	Wheat	plasma membrane	56.36	54.14
Os07t0510200-01	Rice	plasma membrane	57.14	54.07
KXG36295	Sorghum	plasma membrane	56.75	53.6
AT1G66250.1	Thale cress	vacuole	51.47	52.08
AT3G13560.4	Thale cress	plasma membrane	43.44	43.96
Zm00001d021598_P005	Maize	plasma membrane	55.97	43.47
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	33.07	36.82
AT2G05790.1	Thale cress	extracellular, vacuole	33.66	36.44
AT3G46570.1	Thale cress	vacuole	25.24	36.24
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	32.09	35.27
AT5G56590.1	Thale cress	extracellular, plasma membrane, vacuole	34.83	35.18
AT3G55430.1	Thale cress	extracellular	30.72	34.97
AT5G24318.1	Thale cress	extracellular	31.31	34.93
AT4G29360.2	Thale cress	vacuole	36.59	34.38
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	33.86	34.33
AT2G27500.1	Thale cress	vacuole	25.64	33.42
AT2G16230.1	Thale cress	vacuole	32.68	33.2
AT3G23770.1	Thale cress	extracellular	30.92	33.19
AT3G07320.1	Thale cress	extracellular, vacuole	29.35	32.61
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	24.46	32.22
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	27.59	32.19
AT1G30080.1	Thale cress	vacuole	25.44	31.86
AT3G15800.1	Thale cress	golgi, plastid, vacuole	24.66	31.58
AT5G42100.1	Thale cress	extracellular, vacuole	26.22	31.53
AT1G32860.1	Thale cress	extracellular, plasma membrane, vacuole	26.22	31.46
AT4G14080.1	Thale cress	vacuole	29.16	31.17
AT4G18340.1	Thale cress	vacuole	23.29	29.97
HORVU2Hr1G047410.3	Barley	vacuole	32.68	27.69
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	28.57	26.59

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EntrezGene:837730	UniProt:A0A178WFD7	ProteinID:AAC17632.1
EMBL:AC007296	ProteinID:AEE28791.1	ArrayExpress:AT1G11820	EnsemblPlantsGene:AT1G11820	RefSeq:AT1G11820	TAIR:AT1G11820
RefSeq:AT1G11820-TAIR-G	EnsemblPlants:AT1G11820.2	TAIR:AT1G11820.2	Unigene:At.10643	EMBL:BT004271	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020
GO:GO:0016787	GO:GO:0016798	GO:GO:0030246	GO:GO:0030247	GO:GO:0031225	GO:GO:0042973
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	RefSeq:NP_001184967.1	RefSeq:NP_001323381.1	UniProt:O65399
ProteinID:OAP16471.1	PFAM:PF00332	PFAM:PF07983	PO:PO:0000293	ScanProsite:PS00587	PANTHER:PTHR32227
PANTHER:PTHR32227:SF120	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0000162D2D
InterPro:X8	SEG:seg	:	:	:	:

Description

Glucan endo-1,3-beta-glucosidase 1 [Source:UniProtKB/Swiss-Prot;Acc:O65399]

Coordinates

chr1:-:3991027..3993707

Molecular Weight (calculated)

55633.3 Da

IEP (calculated)

5.559

GRAVY (calculated)

0.040

Length

511 amino acids

Sequence
(BLAST)

001: MAFTSMVSTV PVLFFFFTLL LISANSSSLS HNIKVQEQDK DPFVGFNIGT DVSNLLSPTE LVKFLQAQKV NHVRLYDADP ELLKALAKTK VRVIISVPNN
101: QLLAIGSSNS TAASWIGRNV VAYYPETLIT AISVGDEVLT TVPSSAPLLL PAIESLYNAL VASNLHTQIK VSTPHAASIM LDTFPPSQAY FNQTWHSIMV
201: PLLQFLSKTG SPLMMNLYPY YVYMQNKGVV PLDNCLFEPL TPSKEMVDPN TLLHYTNVLD AMVDAAYVSM KNLNVSDVAV LVTESGWPSK GDSKEPYATI
301: DNADTYNSNL IKHVFDRTGT PLHPEMTSSV YIYELFNEDL RAPPVSEASW GLFYGNSTPV YLLHVSGSGT FLANDTTNQT YCIAMDGVDA KTLQAALDWA
401: CGPGRSNCSE IQPGESCYQP NNVKGHASFA FNSYYQKEGR ASGSCDFKGV AMITTTDPSH GSCIFPGSKK VGNRTQTVVN STEVAAGEAT SRSLSRGFCV
501: TIMILVTFSI L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.