Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 6
- extracellular 5
- vacuole 5
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX83243 | Canola | vacuole | 87.11 | 89.42 |
| Bra000536.1-P | Field mustard | golgi, plasma membrane, vacuole | 86.86 | 89.15 |
| CDY38531 | Canola | golgi, vacuole | 87.37 | 88.74 |
| KRH20124 | Soybean | golgi, vacuole | 66.49 | 66.49 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 66.75 | 66.41 |
| PGSC0003DMT400079432 | Potato | extracellular, vacuole | 66.75 | 66.41 |
| VIT_11s0016g05560.t01 | Wine grape | golgi, vacuole | 67.01 | 65.99 |
| KRH03678 | Soybean | golgi, mitochondrion, plasma membrane, plastid, vacuole | 67.01 | 62.2 |
| GSMUA_AchrUn_... | Banana | cytosol | 47.42 | 61.95 |
| EER88625 | Sorghum | extracellular, plasma membrane, vacuole | 56.7 | 56.12 |
| GSMUA_Achr7P13110_001 | Banana | golgi, vacuole | 48.45 | 56.12 |
| AT3G15800.1 | Thale cress | golgi, plastid, vacuole | 57.22 | 55.64 |
| Zm00001d046534_P001 | Maize | plasma membrane | 55.67 | 54.82 |
| TraesCS7A01G378100.1 | Wheat | golgi, vacuole | 56.19 | 54.64 |
| HORVU0Hr1G021950.4 | Barley | golgi, vacuole | 55.41 | 53.75 |
| TraesCS7B01G279900.1 | Wheat | golgi, vacuole | 55.15 | 53.63 |
| TraesCS7D01G374900.1 | Wheat | plastid, vacuole | 55.67 | 48.87 |
| Os06t0607000-01 | Rice | plasma membrane | 58.76 | 47.3 |
| AT2G27500.1 | Thale cress | vacuole | 40.72 | 40.31 |
| AT1G32860.1 | Thale cress | extracellular, plasma membrane, vacuole | 42.27 | 38.5 |
| AT3G46570.1 | Thale cress | vacuole | 34.79 | 37.92 |
| AT4G18340.1 | Thale cress | vacuole | 37.11 | 36.27 |
| AT5G42100.1 | Thale cress | extracellular, vacuole | 39.43 | 36.0 |
| AT1G30080.1 | Thale cress | vacuole | 37.63 | 35.78 |
| GSMUA_Achr5P05970_001 | Banana | plasma membrane, plastid, vacuole | 45.36 | 34.31 |
| AT5G42720.1 | Thale cress | extracellular, plasma membrane, vacuole | 38.4 | 34.02 |
| AT4G26830.2 | Thale cress | endoplasmic reticulum, extracellular | 39.18 | 33.12 |
| AT2G05790.1 | Thale cress | extracellular, vacuole | 38.14 | 31.36 |
| AT5G55180.2 | Thale cress | endoplasmic reticulum, extracellular | 37.37 | 31.18 |
| AT5G24318.1 | Thale cress | extracellular | 34.54 | 29.26 |
| AT3G55430.1 | Thale cress | extracellular | 33.51 | 28.95 |
| AT2G16230.1 | Thale cress | vacuole | 36.34 | 28.03 |
| AT4G34480.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.34 | 27.98 |
| AT2G01630.1 | Thale cress | extracellular | 35.57 | 27.54 |
| AT3G07320.1 | Thale cress | extracellular, vacuole | 32.47 | 27.39 |
| AT4G29360.2 | Thale cress | vacuole | 36.86 | 26.29 |
| AT5G56590.1 | Thale cress | extracellular, plasma membrane, vacuole | 34.28 | 26.28 |
| AT3G23770.1 | Thale cress | extracellular | 32.22 | 26.26 |
| AT4G14080.1 | Thale cress | vacuole | 32.22 | 26.15 |
| AT3G13560.4 | Thale cress | plasma membrane | 33.25 | 25.54 |
| AT1G66250.1 | Thale cress | vacuole | 32.73 | 25.15 |
| AT1G11820.2 | Thale cress | endoplasmic reticulum, extracellular, plasma membrane | 32.22 | 24.46 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 30.93 | 21.86 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:817201 | ProteinID:AAC14508.2 | ProteinID:AEC07865.1 |
| ProteinID:AEC07866.1 | ArrayExpress:AT2G26600 | EnsemblPlantsGene:AT2G26600 | RefSeq:AT2G26600 | TAIR:AT2G26600 | RefSeq:AT2G26600-TAIR-G |
| EnsemblPlants:AT2G26600.1 | TAIR:AT2G26600.1 | Unigene:At.12391 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0031225 |
| GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | RefSeq:NP_565627.1 | RefSeq:NP_850082.1 | UniProt:O48727 |
| PFAM:PF00332 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025281 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF47 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | UniParc:UPI00000A8CDE |
| SEG:seg | : | : | : | : | : |
Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
Coordinates
chr2:+:11316346..11318520
Molecular Weight (calculated)
43240.9 Da
IEP (calculated)
8.768
GRAVY (calculated)
-0.115
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.