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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 5
  • golgi 6
  • plasma membrane 5
  • endoplasmic reticulum 5
  • vacuole 6
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX83243 Canola vacuole 96.34 97.35
AT2G26600.1 Thale cress endoplasmic reticulum, golgi, vacuole 88.74 87.37
KRH20124 Soybean golgi, vacuole 68.32 67.27
Solyc07g008150.2.1 Tomato extracellular, vacuole 68.59 67.18
PGSC0003DMT400079432 Potato extracellular, vacuole 68.32 66.92
VIT_11s0016g05560.t01 Wine grape golgi, vacuole 65.71 63.71
KRH03678 Soybean golgi, mitochondrion, plasma membrane, plastid, vacuole 68.06 62.2
GSMUA_AchrUn_... Banana cytosol 46.86 60.27
EER88625 Sorghum extracellular, plasma membrane, vacuole 57.59 56.12
CDY20153 Canola plasma membrane 56.81 55.5
CDY21869 Canola plasma membrane 56.81 55.5
GSMUA_Achr7P13110_001 Banana golgi, vacuole 48.17 54.93
Zm00001d046534_P001 Maize plasma membrane 56.28 54.57
TraesCS7A01G378100.1 Wheat golgi, vacuole 56.54 54.14
TraesCS7B01G279900.1 Wheat golgi, vacuole 55.5 53.13
HORVU0Hr1G021950.4 Barley golgi, vacuole 55.5 53.0
TraesCS7D01G374900.1 Wheat plastid, vacuole 56.28 48.64
Os06t0607000-01 Rice plasma membrane 59.42 47.1
CDY30112 Canola cytosol 47.38 42.79
CDY04498 Canola extracellular, vacuole 40.58 40.16
CDX83270 Canola extracellular, vacuole 40.84 40.0
CDY31181 Canola extracellular, vacuole 40.58 39.74
CDX93815 Canola extracellular 42.41 39.13
CDY69080 Canola extracellular 42.41 38.76
CDX99881 Canola extracellular, vacuole 38.22 38.62
CDY26296 Canola extracellular, plasma membrane, vacuole 38.48 36.84
CDY13362 Canola extracellular, vacuole 39.79 36.72
CDX90225 Canola vacuole 38.74 36.54
CDY63842 Canola golgi, vacuole 27.23 36.11
CDX99476 Canola vacuole 37.7 35.91
CDX78840 Canola vacuole 37.7 35.91
CDX67530 Canola extracellular 40.05 35.83
CDX76528 Canola extracellular, vacuole 36.91 35.61
CDY01532 Canola vacuole 36.91 35.52
CDX90405 Canola vacuole 36.65 35.26
CDX97707 Canola plastid 50.26 34.97
CDY34065 Canola extracellular, vacuole 36.65 34.65
CDX71449 Canola plasma membrane, vacuole 40.58 34.14
GSMUA_Achr5P05970_001 Banana plasma membrane, plastid, vacuole 45.81 34.11
CDY18049 Canola extracellular, vacuole 39.27 33.94
CDY56498 Canola extracellular, vacuole 39.27 33.94
CDY46679 Canola extracellular, vacuole 39.01 33.41
CDY20780 Canola extracellular, vacuole 39.27 33.41
CDY17308 Canola extracellular, vacuole 39.27 33.41
CDY06601 Canola endoplasmic reticulum, extracellular 39.01 33.18
CDY22386 Canola extracellular, vacuole 36.91 32.64
CDX92794 Canola endoplasmic reticulum, extracellular 38.48 32.59
CDX71547 Canola extracellular, vacuole 37.17 32.57
CDY19908 Canola extracellular, vacuole 39.01 32.46
CDY36734 Canola extracellular, vacuole 38.48 31.96
CDY12009 Canola extracellular, vacuole 38.22 31.74
CDY20461 Canola extracellular 35.34 30.0
CDY53600 Canola extracellular 34.82 29.56
CDY40219 Canola extracellular 34.82 29.56
CDY41232 Canola extracellular 34.29 29.05
CDY53692 Canola extracellular 34.03 28.95
CDY40218 Canola extracellular 34.03 28.7
CDX76097 Canola extracellular 33.77 28.6
CDY41234 Canola extracellular 34.03 28.57
CDY62387 Canola extracellular 33.51 28.51
CDY02936 Canola extracellular 33.51 28.32
CDX87130 Canola vacuole 34.29 28.17
CDX69064 Canola extracellular, plasma membrane, vacuole 37.17 28.12
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.91 28.03
CDY64970 Canola extracellular, plasma membrane, vacuole 36.91 28.03
CDY26761 Canola vacuole 37.43 27.93
CDY37244 Canola vacuole 37.43 27.93
CDY08004 Canola vacuole 33.51 27.83
CDY45466 Canola vacuole 33.51 27.83
CDY24629 Canola vacuole 33.51 27.83
CDY28063 Canola vacuole 33.51 27.83
CDX75437 Canola extracellular, plasma membrane, vacuole 36.65 27.67
CDY48807 Canola extracellular 35.86 27.57
CDY09427 Canola extracellular 35.86 27.57
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 36.91 27.49
CDY19838 Canola extracellular, vacuole 33.51 27.41
CDY59775 Canola extracellular, vacuole 33.77 27.22
CDY63754 Canola extracellular, vacuole 33.77 26.99
CDY62033 Canola extracellular, plasma membrane, vacuole 36.91 26.45
CDY18092 Canola extracellular, vacuole 32.72 26.26
CDY50110 Canola extracellular, vacuole 32.46 26.05
CDY53213 Canola extracellular, vacuole 32.72 26.04
CDY06818 Canola extracellular, plasma membrane, vacuole 34.03 25.9
CDY58676 Canola extracellular, vacuole 33.77 25.6
CDY16440 Canola extracellular 33.51 25.4
CDY06469 Canola extracellular 31.15 24.84
CDY27122 Canola extracellular, vacuole 31.15 24.84
CDY08310 Canola extracellular, vacuole 31.15 24.84
CDY12732 Canola extracellular, vacuole 31.15 24.79
CDY12371 Canola extracellular, vacuole 30.89 24.63
CDY01191 Canola extracellular, vacuole 30.89 24.58
CDY21013 Canola extracellular 32.98 24.28
CDY59252 Canola extracellular, plasma membrane, vacuole 25.65 24.02
CDY31214 Canola vacuole 32.72 23.95
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 25.92 23.52
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 25.92 23.35
CDX74052 Canola vacuole 33.51 22.57
CDY67322 Canola extracellular 12.57 21.72
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078HLS4UniProt:A0A078HLS4EnsemblPlants:CDY38531
ProteinID:CDY38531ProteinID:CDY38531.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00066181001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
PFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF47SUPFAM:SSF51445SignalP:SignalP-noTMUniParc:UPI0004EEC97A
SEG:seg:::::
Description
BnaC03g26660DBnaC03g26660D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HLS4]
Coordinates
chrLK032425:+:227312..229063
Molecular Weight (calculated)
42034.5 Da
IEP (calculated)
6.936
GRAVY (calculated)
-0.055
Length
382 amino acids
Sequence
(BLAST)
001: MRSSGLLLLN FLFFSPILTG LEAKGAFVGT YGINYGRIAD NIPSPDKVVL LLKQAKIRNV RIYDADHTVL QAFSGTGLDL VVGLPNGFLK EMSSNADHAL
101: TWVKDNVQSF LPNTRIRGIA VGNEVLGGGD SELSGALLGA AKNVYNALKK MNLEETVQIT TAHSQAVFAD SYPPSSCVFK ENVVQFMKPL LEFFDQIGSP
201: FCLNAYPFLA YTYNPTQIDI NYALFKPTEG IYDPKTNLRY DNMLDAQIDA AYMALEDAGF KEMEVMITET GWASKGDSDE PAATPENART YNYNLRKRLA
301: KKKGTPLRPK MVLKAYIFAL FNENSKPGKS SETHFGLYKP DGTISYDIGF NSLKSDAPFS SSKLASCYVA LVISISVFLV MI
Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)
001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [golgi,endoplasmic reticulum,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.