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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, vacuole

Predictor Summary:
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 3
  • golgi 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:mitochondrion
MultiLoc:vacuole
PProwler:secretory
TargetP:secretory
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90225 Canola vacuole 93.75 66.67
Bra010800.1-P Field mustard vacuole 84.72 63.87
CDY26296 Canola extracellular, plasma membrane, vacuole 83.68 60.4
CDX99881 Canola extracellular, vacuole 77.43 58.99
AT1G30080.1 Thale cress vacuole 82.99 58.58
VIT_10s0003g03690.t01 Wine grape extracellular 64.24 49.33
CDX99476 Canola vacuole 56.94 40.9
CDX78840 Canola vacuole 56.94 40.9
CDX90405 Canola vacuole 55.21 40.05
CDY01532 Canola vacuole 54.86 39.8
CDX76528 Canola extracellular, vacuole 53.82 39.14
CDY34065 Canola extracellular, vacuole 53.47 38.12
Zm00001d046134_P001 Maize endoplasmic reticulum, extracellular, plasma membrane 53.82 38.08
EER88444 Sorghum extracellular, vacuole 53.82 37.99
TraesCS7D01G329400.1 Wheat endoplasmic reticulum, extracellular 52.78 37.53
TraesCS7B01G233500.1 Wheat extracellular 52.78 37.53
TraesCS7A01G349200.1 Wheat endoplasmic reticulum, extracellular 52.78 37.53
CDY04498 Canola extracellular, vacuole 45.83 34.2
HORVU7Hr1G079650.7 Barley extracellular, vacuole 51.04 33.49
CDX83270 Canola extracellular, vacuole 43.4 32.05
CDY31181 Canola extracellular, vacuole 43.06 31.79
CDX93815 Canola extracellular 44.44 30.92
CDY69080 Canola extracellular 44.44 30.62
CDY13362 Canola extracellular, vacuole 42.71 29.71
Os06t0531000-00 Rice vacuole 50.69 29.44
CDY21869 Canola plasma membrane 39.93 29.41
CDY20153 Canola plasma membrane 39.93 29.41
CDX67530 Canola extracellular 43.4 29.27
CDX71449 Canola plasma membrane, vacuole 44.44 28.19
CDY56498 Canola extracellular, vacuole 42.36 27.6
CDY18049 Canola extracellular, vacuole 42.01 27.38
CDY38531 Canola golgi, vacuole 36.11 27.23
CDX83243 Canola vacuole 35.42 26.98
CDY30112 Canola cytosol 39.58 26.95
CDX92794 Canola endoplasmic reticulum, extracellular 41.32 26.39
CDY20780 Canola extracellular, vacuole 40.97 26.28
CDY46679 Canola extracellular, vacuole 40.62 26.23
CDY06601 Canola endoplasmic reticulum, extracellular 40.62 26.06
CDY17308 Canola extracellular, vacuole 40.62 26.06
CDY19908 Canola extracellular, vacuole 40.62 25.49
CDY22386 Canola extracellular, vacuole 38.19 25.46
CDX71547 Canola extracellular, vacuole 38.54 25.46
CDY36734 Canola extracellular, vacuole 40.62 25.43
CDY12009 Canola extracellular, vacuole 40.62 25.43
CDX87130 Canola vacuole 40.62 25.16
CDY19838 Canola extracellular, vacuole 39.93 24.63
CDY67322 Canola extracellular 18.4 23.98
CDX69064 Canola extracellular, plasma membrane, vacuole 38.89 22.18
CDY20461 Canola extracellular 34.38 22.0
CDX75437 Canola extracellular, plasma membrane, vacuole 38.54 21.94
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 31.94 21.7
CDY53600 Canola extracellular 33.68 21.56
CDY59775 Canola extracellular, vacuole 35.42 21.52
CDY26761 Canola vacuole 38.19 21.48
CDY40219 Canola extracellular 33.33 21.33
CDY24629 Canola vacuole 34.03 21.3
CDY37244 Canola vacuole 37.85 21.29
CDY63754 Canola extracellular, vacuole 35.07 21.13
CDY41232 Canola extracellular 32.99 21.06
CDX76097 Canola extracellular 32.99 21.06
CDY41234 Canola extracellular 32.99 20.88
CDY28063 Canola vacuole 33.33 20.87
CDY53213 Canola extracellular, vacuole 34.72 20.83
CDY02936 Canola extracellular 32.64 20.8
CDX97707 Canola plastid 39.58 20.77
CDY62387 Canola extracellular 32.29 20.71
CDY53692 Canola extracellular 32.29 20.71
CDY64970 Canola extracellular, plasma membrane, vacuole 36.11 20.68
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.11 20.68
CDY40218 Canola extracellular 32.29 20.53
CDY48807 Canola extracellular 35.42 20.52
CDY45466 Canola vacuole 32.64 20.43
CDY08004 Canola vacuole 32.64 20.43
CDY50110 Canola extracellular, vacuole 33.68 20.38
CDY18092 Canola extracellular, vacuole 33.68 20.38
CDY09427 Canola extracellular 35.07 20.32
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 36.11 20.27
CDY01191 Canola extracellular, vacuole 32.99 19.79
CDY12732 Canola extracellular, vacuole 32.99 19.79
CDY62033 Canola extracellular, plasma membrane, vacuole 36.46 19.7
CDY16440 Canola extracellular 34.38 19.64
CDY06469 Canola extracellular 32.64 19.62
CDY58676 Canola extracellular, vacuole 33.68 19.25
CDY12371 Canola extracellular, vacuole 31.94 19.21
CDY08310 Canola extracellular, vacuole 31.94 19.21
CDY27122 Canola extracellular, vacuole 31.94 19.21
CDY21013 Canola extracellular 33.68 18.69
CDY31214 Canola vacuole 33.33 18.39
CDY06818 Canola extracellular, plasma membrane, vacuole 31.25 17.93
CDX74052 Canola vacuole 32.29 16.4
CDY59252 Canola extracellular, plasma membrane, vacuole 22.57 15.93
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 22.57 15.44
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078JCP8UniProt:A0A078JCP8EnsemblPlants:CDY63842
ProteinID:CDY63842ProteinID:CDY63842.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005575
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020GO:GO:0016021GO:GO:0016787
EnsemblPlantsGene:GSBRNA2T00039669001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF85
SUPFAM:SSF51445TMHMM:TMhelixUniParc:UPI0004EDE553SEG:seg::
Description
BnaCnng42710DBnaCnng42710D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JCP8]
Coordinates
chrLK034358:+:3..1268
Molecular Weight (calculated)
32416.1 Da
IEP (calculated)
9.045
GRAVY (calculated)
-0.100
Length
288 amino acids
Sequence
(BLAST)
001: TTFLKRKNFS YLHLYTLLLL CRYLVPAMMS IHAALVQTGL DKYIQVSTPN SLSVLQESYP PSAGCFRPQV TGVMTQLLSF LHSTKSPFWI NAYPYFAYKD
101: SPTKIPLDYV LFNPNPGMVD PYTKYHYDNM LYAQVDAVIF AMARLGFKDI EVGVSETGWP SKGDGDEVGA TVANAAVYNK NLLKRQLQSE GTPLRKNMGL
201: DVYLFALFNE DLKPGPTSER NYGLYQPDET MAYNVGLLSS SQSSTSSTNS IVSLTSSAST DITRGKQRLI YFMCIYLLAI HMLIRRRY
Best Arabidopsis Sequence Match ( AT1G30080.1 )
(BLAST)
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.