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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 4
  • plasma membrane 5
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:vacuole
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY21869 Canola plasma membrane 99.74 99.74
Bra021137.1-P Field mustard plasma membrane 98.47 99.74
AT3G15800.1 Thale cress golgi, plastid, vacuole 82.35 80.7
KRH09724 Soybean extracellular, plasma membrane, vacuole 68.54 69.43
PGSC0003DMT400015234 Potato cytosol, peroxisome, plastid 62.92 66.31
KRH47445 Soybean extracellular, vacuole 65.98 66.15
KRH44462 Soybean extracellular, vacuole 65.47 65.81
CDY30112 Canola cytosol 70.59 65.25
KRH23581 Soybean extracellular, vacuole 59.85 65.18
VIT_09s0002g06880.t01 Wine grape vacuole 66.24 64.91
Solyc06g073710.2.1 Tomato golgi, mitochondrion, plastid, vacuole 62.92 59.71
CDX83243 Canola vacuole 55.75 57.67
CDY38531 Canola golgi, vacuole 55.5 56.81
CDX97707 Canola plastid 75.7 53.92
CDY04498 Canola extracellular, vacuole 42.97 43.52
CDX83270 Canola extracellular, vacuole 42.71 42.82
CDY31181 Canola extracellular, vacuole 42.46 42.56
CDX99881 Canola extracellular, vacuole 39.64 41.01
CDX93815 Canola extracellular 42.46 40.1
CDY63842 Canola golgi, vacuole 29.41 39.93
CDY69080 Canola extracellular 42.46 39.71
CDX90405 Canola vacuole 40.15 39.55
CDY01532 Canola vacuole 39.9 39.29
CDX90225 Canola vacuole 40.41 39.01
CDX99476 Canola vacuole 39.9 38.9
CDX78840 Canola vacuole 39.9 38.9
CDY26296 Canola extracellular, plasma membrane, vacuole 39.64 38.85
CDX76528 Canola extracellular, vacuole 38.62 38.13
CDY34065 Canola extracellular, vacuole 38.62 37.38
CDY13362 Canola extracellular, vacuole 38.87 36.72
CDX71449 Canola plasma membrane, vacuole 41.94 36.12
CDX67530 Canola extracellular 39.13 35.83
CDY56498 Canola extracellular, vacuole 39.39 34.84
CDY18049 Canola extracellular, vacuole 39.39 34.84
CDY22386 Canola extracellular, vacuole 37.08 33.56
CDY17308 Canola extracellular, vacuole 38.36 33.41
CDX71547 Canola extracellular, vacuole 37.08 33.26
CDY20780 Canola extracellular, vacuole 38.11 33.18
CDY06601 Canola endoplasmic reticulum, extracellular 38.11 33.18
CDY46679 Canola extracellular, vacuole 37.85 33.18
CDX92794 Canola endoplasmic reticulum, extracellular 38.11 33.04
CDY19908 Canola extracellular, vacuole 38.36 32.68
CDY36734 Canola extracellular, vacuole 37.85 32.17
CDY12009 Canola extracellular, vacuole 37.34 31.74
CDX87130 Canola vacuole 36.06 30.32
CDY19838 Canola extracellular, vacuole 36.06 30.19
CDX69064 Canola extracellular, plasma membrane, vacuole 38.87 30.1
CDX75437 Canola extracellular, plasma membrane, vacuole 38.87 30.04
CDY24629 Canola vacuole 35.29 30.0
CDY45466 Canola vacuole 35.04 29.78
CDY28063 Canola vacuole 35.04 29.78
CDY26761 Canola vacuole 38.87 29.69
CDY37244 Canola vacuole 38.87 29.69
CDY62387 Canola extracellular 33.76 29.4
CDY20461 Canola extracellular 33.76 29.33
CDX76097 Canola extracellular 33.76 29.27
CDY02936 Canola extracellular 33.76 29.2
CDY53692 Canola extracellular 33.5 29.18
CDY08004 Canola vacuole 34.27 29.13
CDY59775 Canola extracellular, vacuole 35.29 29.11
CDY40218 Canola extracellular 33.5 28.92
CDY40219 Canola extracellular 33.25 28.89
CDY53600 Canola extracellular 32.99 28.67
CDY63754 Canola extracellular, vacuole 35.04 28.66
CDY41232 Canola extracellular 32.99 28.6
CDY18092 Canola extracellular, vacuole 34.78 28.57
CDY41234 Canola extracellular 33.25 28.57
CDY50110 Canola extracellular, vacuole 34.53 28.36
CDY32869 Canola endoplasmic reticulum, extracellular, plasma membrane 36.32 28.23
CDY64970 Canola extracellular, plasma membrane, vacuole 36.32 28.23
CDY48807 Canola extracellular 35.55 27.97
CDY09427 Canola extracellular 35.55 27.97
CDY53213 Canola extracellular, vacuole 34.27 27.92
CDY14214 Canola endoplasmic reticulum, extracellular, vacuole 36.06 27.49
CDY12371 Canola extracellular, vacuole 33.25 27.14
CDY27122 Canola extracellular, vacuole 32.99 26.93
CDY08310 Canola extracellular, vacuole 32.99 26.93
CDY06469 Canola extracellular 32.99 26.93
CDY12732 Canola extracellular, vacuole 32.74 26.67
CDY01191 Canola extracellular, vacuole 32.48 26.46
CDY62033 Canola extracellular, plasma membrane, vacuole 36.06 26.45
CDY58676 Canola extracellular, vacuole 34.02 26.39
CDY16440 Canola extracellular 34.02 26.39
CDY06818 Canola extracellular, plasma membrane, vacuole 32.74 25.5
CDY59252 Canola extracellular, plasma membrane, vacuole 26.6 25.49
CDY23618 Canola endoplasmic reticulum, plasma membrane, vacuole 25.83 23.99
CDY67322 Canola extracellular 13.55 23.98
CDY68826 Canola cytosol, endoplasmic reticulum, peroxisome 25.58 23.58
CDY31214 Canola vacuole 31.46 23.56
CDX74052 Canola vacuole 34.02 23.46
CDY21013 Canola extracellular 30.69 23.12
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2GO:A0A078G699UniProt:A0A078G699EnsemblPlants:CDY20153
ProteinID:CDY20153ProteinID:CDY20153.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005975
GO:GO:0008150GO:GO:0008152GO:GO:0016787EnsemblPlantsGene:GSBRNA2T00010019001InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
PFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF129SUPFAM:SSF51445SignalP:SignalP-TMTMHMM:TMhelix
UniParc:UPI0004EEB476SEG:seg::::
Description
BnaA01g28490DBnaA01g28490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G699]
Coordinates
chrLK032103:+:414567..416785
Molecular Weight (calculated)
43555.4 Da
IEP (calculated)
9.354
GRAVY (calculated)
-0.069
Length
391 amino acids
Sequence
(BLAST)
001: MHSSEMKYSC MVRSTFFLSL LFLFASQTAV AFIGTYGVNY GRIADNLPSP ESVATLLKSA KIRNIRIYDA DHSVLTAFRN TGIEIIVGLG NEFLKDISVA
101: EDRAMTWVKE NVEPFIRGGT RISGIAVGNE ILGGTTIELW EVLLPAAKNV YYALRRLGLH NMVEVSSPHS EAVFQNSYPP SSCTFRDDVA PFMKPLLTFF
201: WQIGSPFYIN AYPFLAYKSD SKEIDLNYAI FEHTKGIYDP KTKLHYDNMF DAMVDASYAA LEKAGFPKVQ VIVSETGWAS KGDPDEAGAS VKNARTYNRN
301: LKKRLKKRKG TPYRPNMAVK AYVFALFNEN LKPGPTSERN FGLFKPDGSI AYDIGFKGLK DSSATRCGFG TSLNALVSAC VVMFLLLHRF V
Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)
001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.