Factsheet for VIT_09s0002g06880.t01

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 9
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH09724	Soybean	extracellular, plasma membrane, vacuole	73.18	75.65
KRH23581	Soybean	extracellular, vacuole	65.66	72.98
KRH44462	Soybean	extracellular, vacuole	70.43	72.24
KRH47445	Soybean	extracellular, vacuole	70.43	72.05
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	66.17	71.16
Bra021137.1-P	Field mustard	plasma membrane	64.66	66.84
CDY21869	Canola	plasma membrane	65.16	66.5
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	65.41	66.24
CDY20153	Canola	plasma membrane	64.91	66.24
AT3G15800.1	Thale cress	golgi, plastid, vacuole	65.91	65.91
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	66.17	64.08
CDY30112	Canola	cytosol	56.64	53.43
VIT_10s0003g03690.t01	Wine grape	extracellular	40.6	43.2
CDX97707	Canola	plastid	58.9	42.81
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	42.61	41.46
Bra027207.1-P	Field mustard	plastid	54.64	41.29
VIT_02s0025g02770.t01	Wine grape	extracellular	40.6	40.0
VIT_06s0004g04750.t01	Wine grape	extracellular	32.83	36.39
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	39.85	33.76
VIT_18s0122g00980.t01	Wine grape	extracellular	38.1	33.04
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	38.1	32.69
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	38.85	31.63
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	35.34	31.54
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	37.09	31.42
VIT_16s0098g01560.t01	Wine grape	extracellular	34.84	30.15
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	36.09	29.15
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	35.59	28.51
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	35.09	28.34
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	33.08	27.91
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	31.08	26.55
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	32.08	22.57

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100252579	wikigene:100252579	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:AM455967
ProteinID:CAN70046	ProteinID:CAN70046.1	ProteinID:CBI36326	ProteinID:CBI36326.3	UniProt:D7U130	EMBL:FN596494
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100252579
wikigene:LOC100252579	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF129	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0001BE4AC3	ArrayExpress:VIT_09s0002g06880	EnsemblPlantsGene:VIT_09s0002g06880	EnsemblPlants:VIT_09s0002g06880.t01	RefSeq:XP_002265779
RefSeq:XP_002265779.2	RefSeq:XP_002265779.3	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:+:6780762..6782615

Molecular Weight (calculated)

43645.4 Da

IEP (calculated)

6.635

GRAVY (calculated)

0.111

Length

399 amino acids

Sequence
(BLAST)

001: MLLPVQFASN QMGFSSLFFL LFLLLLSPID LSVHAFTGTY GINYGRIADN IPSPESVVTL LKAAKIKNVR IYDANHDVLT AFKGSGIEII VGLGNEFLKQ
101: ISVGEDHAID WIKENVQPFL PGTKIRGIAV GNEVLGSTDP ELWEVLLNAV KNVYSAVSRL HLADDIEVSS PHSEAVFANS FPPSACIFKE TLLPYMKPLL
201: QFFSQIGSPF YINAYPFLAY MSDPEHIDLN YALFQSNPGI YDSKTNLHYD NMFDAQVDAA YAALEKAGFA KMEVIVSETG WASKGDATEA GATVKNARTY
301: NYNLRKRLMK KKGTPYRPKI AVKAYIFALF NENLKPGPTS ERNFGLFKAD GSISYDIGFT GLTSAASSLK VTGAGGWFQS SYLVVFATCA AVVPLALTS

Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)

001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.