Factsheet for VIT_13s0019g01180.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	61.3	59.31
KRH01668	Soybean	extracellular	58.39	57.24
Bra007161.1-P	Field mustard	extracellular	56.82	56.07
CDY40218	Canola	extracellular	56.82	56.07
Solyc07g005330.2.1	Tomato	extracellular	57.49	55.99
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	50.78	55.91
AT3G55430.1	Thale cress	extracellular	56.15	55.9
CDY62387	Canola	extracellular	55.7	55.46
PGSC0003DMT400008245	Potato	vacuole	57.27	55.41
CDY41234	Canola	extracellular	56.38	55.38
CDY53692	Canola	extracellular	55.26	55.01
Bra003212.1-P	Field mustard	extracellular	55.03	54.79
CDX76097	Canola	extracellular	55.26	54.77
CDY41232	Canola	extracellular	55.26	54.77
CDY02936	Canola	extracellular	55.26	54.65
Bra014747.1-P	Field mustard	extracellular	55.03	54.55
VIT_16s0098g01560.t01	Wine grape	extracellular	56.15	54.45
CDY40219	Canola	extracellular	54.81	54.44
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	52.35	54.42
Bra007162.1-P	Field mustard	extracellular	54.59	54.22
VIT_06s0004g04750.t01	Wine grape	extracellular	42.06	52.22
TraesCS5A01G329700.1	Wheat	vacuole	45.64	51.91
TraesCSU01G204400.1	Wheat	extracellular, vacuole	45.19	51.4
TraesCSU01G239400.1	Wheat	extracellular, vacuole	45.19	51.4
TraesCS5D01G335600.1	Wheat	vacuole	44.97	51.15
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	51.23	51.0
TraesCS4B01G142000.1	Wheat	golgi	52.13	50.43
TraesCS4A01G175900.1	Wheat	extracellular	51.68	50.11
Os11t0704600-01	Rice	extracellular	52.8	50.0
CDY20461	Canola	extracellular	49.66	49.33
Bra005028.1-P	Field mustard	extracellular	49.44	49.33
PGSC0003DMT400060499	Potato	extracellular	55.03	48.81
CDY53600	Canola	extracellular	48.99	48.67
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	50.34	48.18
Zm00001d004768_P001	Maize	extracellular	48.77	48.02
Solyc05g054440.2.1	Tomato	unclear	54.59	46.39
HORVU4Hr1G027740.1	Barley	vacuole	51.01	45.69
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	47.65	45.13
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	46.09	44.3
Zm00001d019248_P001	Maize	extracellular, vacuole	49.22	44.18
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	47.2	43.78
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	47.87	42.54
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	46.53	42.45
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	46.53	42.45
VIT_10s0003g03690.t01	Wine grape	extracellular	35.35	42.13
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	46.76	41.72
KXG34744	Sorghum	vacuole	46.53	41.11
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	49.66	40.44
VIT_18s0122g00980.t01	Wine grape	extracellular	41.61	40.43
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	41.61	39.49
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	40.49	38.43
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	40.04	36.23
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	32.89	35.85
VIT_09s0002g06880.t01	Wine grape	vacuole	31.54	35.34
VIT_02s0025g02770.t01	Wine grape	extracellular	31.99	35.31
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	36.02	34.48
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	29.75	33.76
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	35.12	31.78
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	35.35	31.73
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	32.66	30.87
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	36.47	28.75

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100256478	wikigene:100256478	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:AM475102
ProteinID:CAN83700	ProteinID:CAN83700.1	ProteinID:CCB56352	ProteinID:CCB56352.1	UniProt:F6HNY2	EMBL:FN595998
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787
GO:GO:0016798	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
EntrezGene:LOC100256478	wikigene:LOC100256478	PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227
PANTHER:PTHR32227:SF62	SMART:SM00768	SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI000198472A	ArrayExpress:VIT_13s0019g01180
EnsemblPlantsGene:VIT_13s0019g01180	EnsemblPlants:VIT_13s0019g01180.t01	unigene:Vvi.15597	unigene:Vvi.25457	InterPro:X8	RefSeq:XP_002283647
RefSeq:XP_002283647.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr13:+:2859157..2862032

Molecular Weight (calculated)

48657.3 Da

IEP (calculated)

8.428

GRAVY (calculated)

-0.066

Length

447 amino acids

Sequence
(BLAST)

001: MALLALQSLR FVIFGVSALL FSATAYSIGV NYGTLADNLP PPAQVANFLK TRTTIDQIKI FDSNPDILRA FASTGIGVTI TVGNGDIPAI TKLPAARDWV
101: ATHILPFYPS TKINYVAVGN EIMATADKNL IGHLVPAMKA LHNALVLAKI TDIKVSTPHS LGILSMSEPP SVGRFRRGYD KVIFAPMLEF HRQTKSPFMV
201: NPYPYFGFSP NMLNYCIFKP NRGVHDKFTG ITYTNMFDAQ MDAVYSAMKV LGYGDVEIMV AETGWPSLGD PNQVGVNLEN AASYNGNLLK HISSGKGTPL
301: MPNRRFQTYL FSLFNENLKP GSTAERNFGL FRPDFTPVYD IGILKQSAGG APTPTVPSGK KWCVPKPDAT DEALQSNINY VCSTGVDCKP IQPGGACYDP
401: NTIRSHASYA MNAYYQTSGR HDFNCDFANT GVLATSDPSH GPCQYIS

Best Arabidopsis Sequence Match ( AT5G24318.1 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSY GNCEYQAN

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.