Factsheet for PGSC0003DMT400008245

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g005330.2.1	Tomato	extracellular	95.24	95.86
PGSC0003DMT400060499	Potato	extracellular	69.91	64.09
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	55.41	57.27
KRH01668	Soybean	extracellular	52.38	53.07
AT3G55430.1	Thale cress	extracellular	50.43	51.89
CDY62387	Canola	extracellular	50.43	51.89
CDY53692	Canola	extracellular	50.43	51.89
CDY40219	Canola	extracellular	50.43	51.78
Bra003212.1-P	Field mustard	extracellular	50.22	51.67
CDY41234	Canola	extracellular	50.87	51.65
PGSC0003DMT400078179	Potato	extracellular	50.0	51.56
Bra007162.1-P	Field mustard	extracellular	50.22	51.56
CDY40218	Canola	extracellular	50.43	51.43
Bra007161.1-P	Field mustard	extracellular	50.22	51.21
CDY02936	Canola	extracellular	49.78	50.88
CDX76097	Canola	extracellular	49.57	50.78
CDY41232	Canola	extracellular	49.57	50.78
Bra014747.1-P	Field mustard	extracellular	49.35	50.55
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	49.13	49.13
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	44.81	48.14
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	41.34	47.04
Os11t0704600-01	Rice	extracellular	47.84	46.82
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	46.54	46.04
TraesCS4B01G142000.1	Wheat	golgi	45.67	45.67
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	44.37	45.66
Zm00001d004768_P001	Maize	extracellular	44.81	45.59
TraesCS4A01G175900.1	Wheat	extracellular	45.24	45.34
TraesCS5D01G335600.1	Wheat	vacuole	37.66	44.27
PGSC0003DMT400047660	Potato	extracellular	36.58	44.24
TraesCSU01G239400.1	Wheat	extracellular, vacuole	37.45	44.02
TraesCSU01G204400.1	Wheat	extracellular, vacuole	37.45	44.02
TraesCS5A01G329700.1	Wheat	vacuole	36.8	43.26
Bra005028.1-P	Field mustard	extracellular	41.13	42.41
HORVU4Hr1G027740.1	Barley	vacuole	45.45	42.08
CDY20461	Canola	extracellular	40.91	42.0
CDY53600	Canola	extracellular	40.69	41.78
PGSC0003DMT400001908	Potato	extracellular	40.91	40.21
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	39.39	38.56
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	37.01	37.5
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	38.96	37.34
Zm00001d019248_P001	Maize	extracellular, vacuole	40.04	37.15
PGSC0003DMT400033482	Potato	extracellular, vacuole	38.1	37.13
PGSC0003DMT400001833	Potato	extracellular, vacuole	37.23	36.75
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	38.96	36.73
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	39.61	36.38
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	39.39	36.33
KXG34744	Sorghum	vacuole	39.18	35.77
PGSC0003DMT400033484	Potato	extracellular, vacuole	30.09	34.84
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	41.34	34.79
PGSC0003DMT400022520	Potato	extracellular, vacuole	34.63	34.48
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	28.36	34.2
PGSC0003DMT400000943	Potato	extracellular, vacuole	35.71	33.27
PGSC0003DMT400012898	Potato	cytosol	29.0	32.6
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	25.11	32.58
PGSC0003DMT400031570	Potato	extracellular, vacuole	29.22	32.45
PGSC0003DMT400013154	Potato	extracellular, vacuole	30.95	32.43
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	25.54	31.81
PGSC0003DMT400079432	Potato	extracellular, vacuole	25.76	30.51
PGSC0003DMT400075818	Potato	extracellular	33.12	30.3
PGSC0003DMT400081837	Potato	extracellular	32.25	29.92
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	32.03	28.24
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	32.25	26.37

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:102594958	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:AFU52649	ProteinID:AFU52649.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EMBL:JX838868	UniProt:K9MBJ7
RefSeq:NP_001275174.1	PFAM:PF00332	PFAM:PF07983	EnsemblPlantsGene:PGSC0003DMG400003181	PGSC:PGSC0003DMG400003181	EnsemblPlants:PGSC0003DMT400008245
ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296C3B0	InterPro:X8	SEG:seg	:	:

Description

Beta-glucosidase 08 [Source:PGSC_GENE;Acc:PGSC0003DMG400003181]

Coordinates

chr7:-:537191..540297

Molecular Weight (calculated)

51290.7 Da

IEP (calculated)

9.326

GRAVY (calculated)

-0.252

Length

462 amino acids

Sequence
(BLAST)

001: MNNISSKTSF ILFFFVIALF LHDVTSIGVN YGTLGNNLPP PAQVAQFIKD KTVIDRVKIF DINPDILRAF ANTGISLTVT VPNGEIPNLL DLAYARRYVE
101: QNIKPHYPQT KIDVVLVGNE VLHWDTPEVQ NKLVPAMKVF YQALGLSGLK GIKVSSAHSL GILLRSNPPS AARFRPGWDV GILAPMLQFL HETKGPFMVN
201: PYPYFGYNKK QEDFLLFRKN KGVYDRFSKK WYMNSFDMLL DAVYMSMVRL KYPDVEIVAA ETGWPSQGET YEPQCTVENA ASYNGGLMKK YNSGMGTPLM
301: PHRKIETYIF SLFNENTKPG SIAERNFGLF RPDFTPVYDV GVLKAKQAHP TPSLPPPKTG GGGNKGQPKT PAENKKFCMP KVGATDAQLQ SNINYVCSQG
401: VDCTPIQVGG SCFKPNTIRS HAAFAMNSYY QREGRNNFNC DFAGTGVVAA SDPSYGTCKF ES

Best Arabidopsis Sequence Match ( AT3G55430.1 )
(BLAST)

001: MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY

Arabidopsis Description

Beta-1, 3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2T6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.