Factsheet for Zm00001d004768_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

plastid 2
vacuole 3
extracellular 3
endoplasmic reticulum 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 20408568
mitochondrion: 27297264
plasma membrane: 27341663

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

msms PMID: 20408568 doi

W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li

Department of Plant Nutrition, China Agricultural University, Beijing, PR China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	89.65	87.15
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	71.59	72.38
TraesCS4B01G142000.1	Wheat	golgi	73.35	72.08
TraesCS4A01G175900.1	Wheat	extracellular	72.25	71.15
Os11t0704600-01	Rice	extracellular	73.57	70.76
HORVU4Hr1G027740.1	Barley	vacuole	71.59	65.13
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	48.02	48.77
KRH01668	Soybean	extracellular	47.58	47.37
AT3G55430.1	Thale cress	extracellular	46.26	46.77
CDX76097	Canola	extracellular	46.26	46.56
Bra014747.1-P	Field mustard	extracellular	46.26	46.56
CDY02936	Canola	extracellular	46.26	46.46
CDY53692	Canola	extracellular	45.59	46.1
CDY62387	Canola	extracellular	45.59	46.1
Bra003212.1-P	Field mustard	extracellular	45.37	45.88
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	45.37	45.78
CDY40218	Canola	extracellular	45.37	45.47
Bra007161.1-P	Field mustard	extracellular	45.37	45.47
CDY40219	Canola	extracellular	44.93	45.33
CDY41234	Canola	extracellular	45.37	45.27
Solyc07g005330.2.1	Tomato	extracellular	45.59	45.1
CDY41232	Canola	extracellular	44.71	45.01
PGSC0003DMT400008245	Potato	vacuole	45.59	44.81
Bra007162.1-P	Field mustard	extracellular	44.27	44.67
Zm00001d019248_P001	Maize	extracellular, vacuole	43.39	39.56
CDY20461	Canola	extracellular	38.55	38.89
Bra005028.1-P	Field mustard	extracellular	38.33	38.84
PGSC0003DMT400060499	Potato	extracellular	42.73	38.49
CDY53600	Canola	extracellular	38.11	38.44
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	38.99	38.23
Solyc05g054440.2.1	Tomato	unclear	44.27	38.21
Zm00001d018214_P001	Maize	extracellular	39.65	36.89
Zm00001d030361_P001	Maize	plasma membrane	32.6	36.63
Zm00001d000117_P001	Maize	plastid, vacuole	30.84	35.26
Zm00001d036051_P001	Maize	extracellular, vacuole	33.04	35.21
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	30.62	35.19
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	31.28	34.89
Zm00001d028410_P001	Maize	vacuole	27.53	34.63
Zm00001d013390_P001	Maize	extracellular	32.6	33.48
Zm00001d010137_P001	Maize	extracellular	29.74	33.33
Zm00001d012292_P001	Maize	mitochondrion	31.06	33.1
Zm00001d031571_P001	Maize	extracellular	34.8	32.78
Zm00001d043524_P001	Maize	plasma membrane	35.68	32.66
Zm00001d028243_P001	Maize	plasma membrane	35.68	32.27
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	38.77	32.06
Zm00001d046534_P001	Maize	plasma membrane	27.75	31.98
Zm00001d042767_P001	Maize	plasma membrane	29.07	31.88
Zm00001d021024_P001	Maize	extracellular	33.26	31.52
Zm00001d004763_P001	Maize	extracellular	32.6	31.36
Zm00001d048055_P001	Maize	plasma membrane	34.58	31.34
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	28.41	30.86
Zm00001d021690_P001	Maize	extracellular	35.68	27.74
Zm00001d028331_P001	Maize	plastid	30.84	26.92
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	29.07	26.83
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	29.52	26.8
Zm00001d006538_P001	Maize	vacuole	36.12	25.27
Zm00001d021695_P001	Maize	extracellular	34.58	24.27
Zm00001d021598_P005	Maize	plasma membrane	32.6	22.49
Zm00001d021697_P001	Maize	extracellular	34.14	22.3

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:1.20.58.1040	Gene3D:3.20.20.80	MapMan:50.3.2	UniProt:A0A1D6EHD9	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	ProteinID:ONM19544.1	PFAM:PF00332	PFAM:PF07983
ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI000844436F	InterPro:X8	EnsemblPlantsGene:Zm00001d004768	EnsemblPlants:Zm00001d004768_P001	EnsemblPlants:Zm00001d004768_T001	SEG:seg

Description

Glycosyl hydrolase superfamily protein

Coordinates

chr2:+:137853555..137856236

Molecular Weight (calculated)

47952.0 Da

IEP (calculated)

6.093

GRAVY (calculated)

-0.043

Length

454 amino acids

Sequence
(BLAST)

001: MLLPLLLAAF LHGLAEAQGG LPSLPIGVNY GANADNLPSP AAVAAFLTKS TTIDRVKLFD ANPAFLDAFA ANAPSIALAV SIPNSALPSF ADRSTGLDAA
101: RGWVRDNLSP HVSAGANITL LMAGNEVLGP TVVPDLVVAL LPAMRRLYQA LQLEGLPKVR VTTPHYLGIL APSDGIPSNA SFRPGLDAKV LAPMLRFHND
201: TGSPFMVNAY PYFSYNAATL DYAVFRPNAG VYDPATRLNY TSMFDAQMDA IHTAMKKLGY GGVQIAVGEA GWPTKAEAGQ VGVGPEEARD FNAGMIRVCS
301: GGKGTPLMPG RTFETYVFSL FDENQKPGPV AERNFGIFNT DLTPKYDLGL LRQGPQSGSP TPSPEPSPSV GGGKWCVAKS GASATDLQNN INYACAYVDC
401: RPIQSGGACL DPNNIHSHAS YVMNAYYQAN GMHDYDCDFK GTGVVTSSDP SKQL

Best Arabidopsis Sequence Match ( AT5G24318.2 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSM NH

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.