CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40218	Canola	extracellular	96.7	97.13
CDY41232	Canola	extracellular	91.43	92.24
CDY40219	Canola	extracellular	90.99	92.0
CDX76097	Canola	extracellular	89.67	90.47
CDY02936	Canola	extracellular	89.45	90.04
AT3G55430.1	Thale cress	extracellular	87.47	88.64
CDY53692	Canola	extracellular	85.71	86.86
CDY62387	Canola	extracellular	85.27	86.41
KRH01668	Soybean	extracellular	57.58	57.46
CDY20461	Canola	extracellular	56.26	56.89
CDY53600	Canola	extracellular	56.26	56.89
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	55.38	56.38
Solyc07g005330.2.1	Tomato	extracellular	52.09	51.63
PGSC0003DMT400008245	Potato	vacuole	51.65	50.87
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	51.21	50.43
TraesCS4B01G142000.1	Wheat	golgi	50.33	49.57
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	48.79	49.44
TraesCS4A01G175900.1	Wheat	extracellular	49.45	48.81
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	43.52	48.77
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	45.27	47.91
Os11t0704600-01	Rice	extracellular	49.67	47.88
EES10308	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.13	46.9
HORVU4Hr1G027740.1	Barley	vacuole	50.77	46.29
PGSC0003DMT400060499	Potato	extracellular	50.33	45.44
Zm00001d004768_P001	Maize	extracellular	45.27	45.37
TraesCS5A01G329700.1	Wheat	vacuole	39.12	45.29
Solyc05g054440.2.1	Tomato	unclear	52.31	45.25
CDX87130	Canola	vacuole	45.93	44.95
CDY19838	Canola	extracellular, vacuole	45.93	44.75
TraesCS5D01G335600.1	Wheat	vacuole	38.46	44.53
TraesCSU01G204400.1	Wheat	extracellular, vacuole	38.24	44.27
TraesCSU01G239400.1	Wheat	extracellular, vacuole	38.24	44.27
Zm00001d019248_P001	Maize	extracellular, vacuole	43.08	39.36
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	40.44	38.98
KXG34744	Sorghum	vacuole	42.86	38.54
CDX92794	Canola	endoplasmic reticulum, extracellular	37.8	38.14
CDX69064	Canola	extracellular, plasma membrane, vacuole	41.76	37.62
CDY56498	Canola	extracellular, vacuole	36.48	37.56
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	39.78	37.55
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	40.44	37.55
CDX75437	Canola	extracellular, plasma membrane, vacuole	41.54	37.35
CDY18049	Canola	extracellular, vacuole	36.26	37.33
CDY46679	Canola	extracellular, vacuole	36.48	37.22
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	40.66	36.93
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	40.44	36.58
CDY36734	Canola	extracellular, vacuole	36.48	36.09
CDY37244	Canola	vacuole	40.44	35.94
CDY17308	Canola	extracellular, vacuole	35.38	35.86
CDX99881	Canola	extracellular, vacuole	29.67	35.71
CDY12009	Canola	extracellular, vacuole	36.04	35.65
CDY31181	Canola	extracellular, vacuole	30.55	35.64
CDY04498	Canola	extracellular, vacuole	30.11	35.49
CDY06601	Canola	endoplasmic reticulum, extracellular	34.95	35.41
CDX83270	Canola	extracellular, vacuole	30.33	35.38
CDY26761	Canola	vacuole	39.78	35.35
CDY20780	Canola	extracellular, vacuole	34.73	35.19
CDY19908	Canola	extracellular, vacuole	35.38	35.08
CDY22386	Canola	extracellular, vacuole	32.97	34.72
CDX90225	Canola	vacuole	30.77	34.57
CDX93815	Canola	extracellular	31.43	34.54
CDY26296	Canola	extracellular, plasma membrane, vacuole	30.11	34.34
CDY69080	Canola	extracellular	31.43	34.21
CDX71547	Canola	extracellular, vacuole	32.75	34.17
CDX83243	Canola	vacuole	28.35	34.13
CDY38531	Canola	golgi, vacuole	28.57	34.03
CDY28063	Canola	vacuole	34.07	33.7
CDY08004	Canola	vacuole	33.85	33.48
CDY24629	Canola	vacuole	33.85	33.48
CDY13362	Canola	extracellular, vacuole	30.33	33.33
CDY20153	Canola	plasma membrane	28.57	33.25
CDY21869	Canola	plasma membrane	28.57	33.25
CDY45466	Canola	vacuole	33.41	33.04
CDX67530	Canola	extracellular	30.99	33.02
CDY63842	Canola	golgi, vacuole	20.88	32.99
CDX78840	Canola	vacuole	28.57	32.42
CDX99476	Canola	vacuole	28.57	32.42
CDY64970	Canola	extracellular, plasma membrane, vacuole	35.6	32.21
CDY32869	Canola	endoplasmic reticulum, extracellular, plasma membrane	35.38	32.01
CDY01532	Canola	vacuole	27.91	31.99
CDX76528	Canola	extracellular, vacuole	27.47	31.57
CDY08310	Canola	extracellular, vacuole	33.19	31.52
CDX90405	Canola	vacuole	27.47	31.49
CDY01191	Canola	extracellular, vacuole	32.75	31.04
CDY12732	Canola	extracellular, vacuole	32.75	31.04
CDY09427	Canola	extracellular	33.85	30.99
CDY34065	Canola	extracellular, vacuole	27.47	30.94
CDY06469	Canola	extracellular	32.53	30.9
CDY18092	Canola	extracellular, vacuole	32.31	30.88
CDY48807	Canola	extracellular	33.63	30.78
CDY67322	Canola	extracellular	14.95	30.77
CDY12371	Canola	extracellular, vacuole	32.31	30.69
CDY50110	Canola	extracellular, vacuole	32.09	30.67
CDY59775	Canola	extracellular, vacuole	31.87	30.59
CDY53213	Canola	extracellular, vacuole	32.09	30.42
CDY63754	Canola	extracellular, vacuole	31.87	30.33
CDY27122	Canola	extracellular, vacuole	31.87	30.27
CDY14214	Canola	endoplasmic reticulum, extracellular, vacuole	33.85	30.02
CDX71449	Canola	plasma membrane, vacuole	29.67	29.74
CDY62033	Canola	extracellular, plasma membrane, vacuole	34.29	29.27
CDY21013	Canola	extracellular	33.19	29.09
CDY31214	Canola	vacuole	33.19	28.93
CDY06818	Canola	extracellular, plasma membrane, vacuole	31.87	28.88
CDY16440	Canola	extracellular	31.65	28.57
CDY68826	Canola	cytosol, endoplasmic reticulum, peroxisome	26.59	28.54
CDY58676	Canola	extracellular, vacuole	31.43	28.37
CDY59252	Canola	extracellular, plasma membrane, vacuole	25.27	28.19
CDY23618	Canola	endoplasmic reticulum, plasma membrane, vacuole	25.49	27.55
CDY30112	Canola	cytosol	25.05	26.95
CDX74052	Canola	vacuole	33.41	26.81
CDX97707	Canola	plastid	25.05	20.77

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:1.20.58.1040	Gene3D:3.20.20.80	MapMan:50.3.2	GO:A0A078HV56	UniProt:A0A078HV56
EnsemblPlants:CDY41234	ProteinID:CDY41234	ProteinID:CDY41234.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00072656001	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	PFAM:PF00332	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF142	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EB4F90	InterPro:X8	SEG:seg

Description

BnaC08g26240DBnaC08g26240D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HV56]

Coordinates

chrLK032493:+:264300..266401

Molecular Weight (calculated)

48922.5 Da

IEP (calculated)

9.244

GRAVY (calculated)

-0.102

Length

455 amino acids

Sequence
(BLAST)

001: MATAPPSISL LLLLLSAAVF LTLPATISSI GVNYGTLGNL PPPTQVANFL KTQTSIDSVK IFNVNPDIIR AFAGTGISVV VTVPNGDIPA LANGVQARRW
101: VSANIQPFHP QTKIKYISVG NEILLSGDDN MIKNLLPAMK NLNAALVRAG VKDVKVTTAH SLNIIAYELN GAPSSGRFRP GWDKGVLAPI LAYHRQTKSP
201: FMVNPYPYFG FDPKNVNFAI FRSPYKAVRD PLTGKVYTNM YDTLMDSTYS AMKALGYGDV DIVVGETGWP SACDAPWCSL ENAAWFNLNI IKRAQGQGTP
301: LMPNRRFETY IFGLFNEEGK PGPTAERNWG LFRSDFSPVY DVGLLRNKQG GGGGVRPAPA LPTPSTAGGK WCVAKSEATD AQLQGNIDWV CSQGGIDCKP
401: IQTGGSCFNP SSVRSQASFV MNAYFQRNGR TDGSCNFSGT GVIVGNNPSN DACKY

Best Arabidopsis Sequence Match ( AT3G55430.1 )
(BLAST)

001: MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY

Arabidopsis Description

Beta-1, 3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2T6]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.