Factsheet for TraesCSU01G239400.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G204400.1	Wheat	extracellular, vacuole	100.0	100.0
TraesCS5D01G335600.1	Wheat	vacuole	94.4	94.4
TraesCS5A01G329700.1	Wheat	vacuole	90.84	90.84
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	88.3	68.99
Zm00001d019248_P001	Maize	extracellular, vacuole	69.72	55.02
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	67.94	53.29
KXG34744	Sorghum	vacuole	66.41	51.58
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	51.4	45.19
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	45.04	41.16
CDY53692	Canola	extracellular	46.56	40.76
Bra003212.1-P	Field mustard	extracellular	46.31	40.53
CDY62387	Canola	extracellular	45.8	40.09
KRH01668	Soybean	extracellular	46.31	39.91
AT3G55430.1	Thale cress	extracellular	45.55	39.87
CDY40219	Canola	extracellular	45.04	39.33
Bra007162.1-P	Field mustard	extracellular	45.04	39.33
CDY41232	Canola	extracellular	45.04	39.25
CDY41234	Canola	extracellular	44.27	38.24
CDY40218	Canola	extracellular	44.02	38.19
CDX76097	Canola	extracellular	43.77	38.14
Solyc07g005330.2.1	Tomato	extracellular	44.53	38.13
CDY02936	Canola	extracellular	43.77	38.05
Bra007161.1-P	Field mustard	extracellular	43.77	37.97
Bra014747.1-P	Field mustard	extracellular	43.51	37.92
PGSC0003DMT400008245	Potato	vacuole	44.02	37.45
PGSC0003DMT400060499	Potato	extracellular	45.04	35.12
Bra005028.1-P	Field mustard	extracellular	38.68	33.93
CDY20461	Canola	extracellular	38.68	33.78
Solyc05g054440.2.1	Tomato	unclear	45.04	33.65
TraesCSU01G153100.1	Wheat	extracellular, vacuole	36.64	33.57
CDY53600	Canola	extracellular	38.42	33.56
AT2G39640.1	Thale cress	endoplasmic reticulum, extracellular, vacuole	38.42	27.5

Protein Annotations

EnsemblPlants:TraesCSU01G239400.1	EnsemblPlantsGene:TraesCSU01G239400	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	PFAM:PF00332	ScanProsite:PS00587	SignalP:SignalP-noTM
SUPFAM:SSF51445	TMHMM:TMhelix	MapMan:50.3.2	:	:	:

Description

No Description!

Coordinates

chrUn:+:356552821..356554087

Molecular Weight (calculated)

42093.9 Da

IEP (calculated)

5.028

GRAVY (calculated)

0.059

Length

393 amino acids

Sequence
(BLAST)

001: MATPPRHGCM LRAEVVMCIF LVIAPLSTAI GVNYGTKGDN LPSPAKVAAF LVTLTNIDRV KLFDTNPDIV RAFAGTGISV MVTAGNGDIP GLATQTGADS
101: WVATNIAPYY PATDISLVAV GNEIMDTADK NLIGKLVPAM QMLKDALVTA GYNKIRVSTP SSLNILVDSQ PPSAARFRDV WDDAIFTPML QFLRKTKSPL
201: IVNTYPYFGY NGDTLPYALA RPNSGVLDMG SGIMYTSMFE AQLDSVYSAM KKLGFEDVEI LVGETGWPTK AMDGQIGVSP AEAAEYNKYI IREVSSGSGT
301: PLMPKRKFET YIFTLFNEDL KPGPVAERNF GMFQPDFTPM YDIGIMKDPV KTTTAPGSVV PSAPRKVAAT PMVATADALD VAVPTKANGS NNA

Best Arabidopsis Sequence Match ( AT5G24318.4 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT VINHRRNSQH YLVSYMLTNL FL

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.