Subcellular Localization
min:
: max
Winner_takes_all: unclear
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
unclear:
26455813
|
msms PMID:
26455813
doi
Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium., Goethe University, Department of Biosciences, Molecular Cell Biology of Plants, Frankfurt/Main, Germany; SPOT-ITN Consortium; Goethe University, Cluster of Excellence Frankfurt, Frankfurt/Main, Germany; Goethe University, Buchmann Institute of Molecular Life Sciences, Frankfurt/Main, Germany. Electronic address: schleiff@bio.uni-frankfurt.de., SPOT-ITN Consortium; University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria., University of Vienna, Department of Ecogenomics and Systems biology, Vienna, Austria; School of Biotechnology and Bioinformatics, D.Y. Patil University, Mumbai, India.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400060499 | Potato | extracellular | 89.16 | 93.06 |
| Solyc07g005330.2.1 | Tomato | extracellular | 60.84 | 69.72 |
| VIT_13s0019g01180.t01 | Wine grape | extracellular, vacuole | 46.39 | 54.59 |
| AT3G55430.1 | Thale cress | extracellular | 45.25 | 53.01 |
| CDY53692 | Canola | extracellular | 45.25 | 53.01 |
| Bra003212.1-P | Field mustard | extracellular | 45.06 | 52.78 |
| Bra007161.1-P | Field mustard | extracellular | 45.44 | 52.76 |
| CDY40218 | Canola | extracellular | 45.44 | 52.76 |
| KRH01668 | Soybean | extracellular | 45.63 | 52.63 |
| CDY62387 | Canola | extracellular | 44.87 | 52.56 |
| CDY41234 | Canola | extracellular | 45.25 | 52.31 |
| CDY40219 | Canola | extracellular | 44.49 | 52.0 |
| Bra007162.1-P | Field mustard | extracellular | 44.49 | 52.0 |
| Solyc06g076170.2.1 | Tomato | extracellular | 44.3 | 51.89 |
| CDX76097 | Canola | extracellular | 44.49 | 51.88 |
| CDY02936 | Canola | extracellular | 44.49 | 51.77 |
| Bra014747.1-P | Field mustard | extracellular | 44.3 | 51.66 |
| CDY41232 | Canola | extracellular | 43.73 | 51.0 |
| GSMUA_Achr6P05040_001 | Banana | extracellular, vacuole | 40.3 | 49.3 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, extracellular, vacuole | 42.4 | 48.27 |
| Os11t0704600-01 | Rice | extracellular | 42.4 | 47.25 |
| GSMUA_Achr11P... | Banana | plasma membrane, vacuole | 35.93 | 46.55 |
| TraesCS4B01G142000.1 | Wheat | golgi | 40.49 | 46.1 |
| Solyc03g082900.2.1 | Tomato | extracellular | 33.08 | 46.03 |
| TraesCS4D01G136800.1 | Wheat | cytosol, extracellular, plastid, vacuole | 39.16 | 45.88 |
| TraesCS4A01G175900.1 | Wheat | extracellular | 40.11 | 45.77 |
| TraesCS5A01G329700.1 | Wheat | vacuole | 34.03 | 45.55 |
| TraesCSU01G239400.1 | Wheat | extracellular, vacuole | 33.65 | 45.04 |
| TraesCSU01G204400.1 | Wheat | extracellular, vacuole | 33.65 | 45.04 |
| TraesCS5D01G335600.1 | Wheat | vacuole | 33.65 | 45.04 |
| Zm00001d004768_P001 | Maize | extracellular | 38.21 | 44.27 |
| Bra005028.1-P | Field mustard | extracellular | 37.64 | 44.2 |
| EES10308 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 39.16 | 44.11 |
| CDY20461 | Canola | extracellular | 37.45 | 43.78 |
| CDY53600 | Canola | extracellular | 37.26 | 43.56 |
| HORVU4Hr1G027740.1 | Barley | vacuole | 39.92 | 42.08 |
| TraesCS5D01G335500.1 | Wheat | golgi, plasma membrane, vacuole | 35.55 | 39.62 |
| Zm00001d019248_P001 | Maize | extracellular, vacuole | 37.07 | 39.16 |
| Os07t0240200-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 37.26 | 39.12 |
| Solyc01g109570.2.1 | Tomato | extracellular | 35.17 | 39.11 |
| Solyc12g040860.1.1 | Tomato | extracellular, plasma membrane, vacuole | 33.84 | 39.04 |
| TraesCS5A01G329600.1 | Wheat | extracellular, plasma membrane, vacuole | 35.55 | 38.8 |
| TraesCS5B01G329800.1 | Wheat | endoplasmic reticulum, golgi, mitochondrion, vacuole | 35.55 | 38.16 |
| KXG34744 | Sorghum | vacuole | 36.31 | 37.75 |
| HORVU5Hr1G083710.1 | Barley | golgi, mitochondrion, vacuole | 35.36 | 36.98 |
| Solyc11g068440.1.1 | Tomato | extracellular | 26.62 | 36.84 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 27.76 | 36.59 |
| Solyc07g049370.2.1 | Tomato | extracellular, vacuole | 32.51 | 36.54 |
| Solyc12g014420.1.1 | Tomato | extracellular | 32.7 | 35.83 |
| AT2G39640.1 | Thale cress | endoplasmic reticulum, extracellular, vacuole | 36.5 | 34.97 |
| Solyc04g080260.2.1 | Tomato | extracellular | 28.71 | 34.24 |
| Solyc09g057630.2.1 | Tomato | nucleus | 29.66 | 33.62 |
| Solyc12g008580.1.1 | Tomato | extracellular | 31.56 | 33.47 |
| Solyc08g083310.2.1 | Tomato | nucleus | 26.24 | 32.62 |
| Solyc11g071520.1.1 | Tomato | extracellular | 23.57 | 32.38 |
| Solyc08g005000.2.1 | Tomato | extracellular | 26.43 | 31.74 |
| Solyc04g007910.2.1 | Tomato | extracellular | 30.42 | 31.68 |
| Solyc12g098560.1.1 | Tomato | extracellular | 27.57 | 31.59 |
| Solyc12g055840.1.1 | Tomato | nucleus | 24.9 | 31.04 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 22.05 | 29.74 |
| Solyc02g080660.2.1 | Tomato | golgi, plasma membrane, vacuole | 22.81 | 29.06 |
| Solyc06g073710.2.1 | Tomato | golgi, mitochondrion, plastid, vacuole | 20.53 | 26.21 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016798 | GO:GO:0030246 |
| GO:GO:0030247 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:K4C2C2 | PFAM:PF00332 |
| PFAM:PF07983 | ScanProsite:PS00587 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF62 | SMART:SM00768 | SUPFAM:SSF51445 |
| EnsemblPlantsGene:Solyc05g054440.2 | EnsemblPlants:Solyc05g054440.2.1 | TMHMM:TMhelix | UniParc:UPI0002766AE2 | InterPro:X8 | SEG:seg |
Description
No Description!
Coordinates
chr5:+:64367498..64370825
Molecular Weight (calculated)
57626.7 Da
IEP (calculated)
9.357
GRAVY (calculated)
-0.227
Length
526 amino acids
Sequence
(BLAST)
(BLAST)
001: MEVSNKKITS PLFTFLFISS IFIQFFPYVS CIGVNYGTLG NNLPPPSQVA QFLKDKTIID KIKIFDVNPD ILKAFANTNI SVTVTVPNSE IPKLQDIGYA
101: KSYVEANIKP FYPQTKIDVI AVGNEILHWE TPEVQNKLVG AMRTLYQALT QSGINTVKVS TPHSLGILLS SNPPSLAKFR PGWDVGILAP MLQFLRETKG
201: PFMVNPYPYF GYNPEQVDFL LFKQNKGVFD NFSKRTYTNM FDMLLDAVFM SMKRLGYDDV DIVAAETGWP SFGESFEPQC TVENAAAYNG GLVRKIVGGV
301: GTPLMPNRKI DTYIFGLFNE NTKPGSNAER NFGLFRPDFT PVYNVGIMKG QQVLPFPQPP KPLPQPQPQP QPQPRGPIPV AKPGPKVPVQ PAPRLPSHPG
401: PKHSARPGPK LPAQPAPRLP AQPGPVLPGP KPVGPMGKKF CMPKPQATDA QLQASLDWAC TNQGVDCGPV QAGGPCFDPN TVRSHAAYVM NAYYQIKGKN
501: DINCDFSGSA AIVFADPSYG TCKYLS
101: KSYVEANIKP FYPQTKIDVI AVGNEILHWE TPEVQNKLVG AMRTLYQALT QSGINTVKVS TPHSLGILLS SNPPSLAKFR PGWDVGILAP MLQFLRETKG
201: PFMVNPYPYF GYNPEQVDFL LFKQNKGVFD NFSKRTYTNM FDMLLDAVFM SMKRLGYDDV DIVAAETGWP SFGESFEPQC TVENAAAYNG GLVRKIVGGV
301: GTPLMPNRKI DTYIFGLFNE NTKPGSNAER NFGLFRPDFT PVYNVGIMKG QQVLPFPQPP KPLPQPQPQP QPQPRGPIPV AKPGPKVPVQ PAPRLPSHPG
401: PKHSARPGPK LPAQPAPRLP AQPGPVLPGP KPVGPMGKKF CMPKPQATDA QLQASLDWAC TNQGVDCGPV QAGGPCFDPN TVRSHAAYVM NAYYQIKGKN
501: DINCDFSGSA AIVFADPSYG TCKYLS
001: MAKAPPSISL LLLLCAAVFL TIPAVISAIG VNYGTLGNLP PPTQVANFIK TQTSIDSVKI FDVNPDILRA FAGTGISVVV TVPNGDIPAL ANGRQARRWV
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY
101: SVNILPFHPQ TKIKYISVGN EILLTGDNNM INNLLPAMRN LNNALVRAGV RDVKVTTAHS LNIIAYDLTG APSSGRFRPG WDKGILAPIL AYHRRTKSPF
201: MVNPYPYFGF DPKNVNFAIF RTPYKAVRDP FTRHVYTNMF DALMDSTYSA MKALGYGDVN IVVGETGWPS ACDAPWCSPA NAAWFNLNII KRAQGQGTPL
301: MPNRRFETYI FGLFNEEGKP GPTAERNWGL FRADFSPVYD VGLLRNGQGG GGRPALPAPS TAGGKWCVAR SGATNTQLQD SINWVCGQGV DCKPIQAGGS
401: CFNPSSLRTH ASFVMNAYFQ SHGRTDGACN FSGTGMIVGN NPSNGACKY
Arabidopsis Description
Beta-1, 3-glucanase-like protein [Source:UniProtKB/TrEMBL;Acc:Q9M2T6]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.