Factsheet for Solyc12g014420.1.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 29876421

msms PMID: 29876421 doi

L Ceballos-Laita, E Gutierrez-Carbonell, D Takahashi, A Abadía, M Uemura, J Abadía, AF López-Millán

Cryobiofrontier Research Center, Faculty of Agriculture, Iwate University, Morioka 020-8550, Japan., Plant Stress Physiology Group, Plant Nutrition Department, Aula Dei Experimental Station, CSIC, P.O. Box 13034, 50080 Zaragoza, Spain., United Graduate School of Agricultural Sciences, Iwate University, Morioka 020-8550, Japan., USDA-ARS Children's Nutrition Research Center, Department of Pediatrics, Baylor College of Medicine, 1100 Bates St., Houston, TX 77030, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400033482	Potato	extracellular, vacuole	94.17	95.36
PGSC0003DMT400033484	Potato	extracellular, vacuole	78.54	94.49
KRH14333	Soybean	endoplasmic reticulum, extracellular	66.88	69.63
CDY20780	Canola	extracellular, vacuole	63.96	68.37
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	67.08	68.37
CDY06601	Canola	endoplasmic reticulum, extracellular	63.54	67.93
CDY17308	Canola	extracellular, vacuole	63.12	67.48
Bra035561.1-P	Field mustard	extracellular, vacuole	64.58	67.39
CDY36734	Canola	extracellular, vacuole	64.17	66.96
KRH73795	Soybean	extracellular, vacuole	65.62	66.74
CDY12009	Canola	extracellular, vacuole	63.75	66.52
CDY46679	Canola	extracellular, vacuole	61.67	66.37
CDY19908	Canola	extracellular, vacuole	63.33	66.23
CDX92794	Canola	endoplasmic reticulum, extracellular	62.08	66.08
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	63.33	65.38
Bra002927.1-P	Field mustard	extracellular, vacuole	62.5	64.79
Solyc07g049370.2.1	Tomato	extracellular, vacuole	62.92	64.53
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	61.25	64.05
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	54.17	63.57
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	62.92	61.26
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	53.54	61.05
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	55.62	57.42
TraesCS6D01G305000.1	Wheat	extracellular	55.42	55.53
TraesCS6B01G355600.1	Wheat	vacuole	55.21	55.44
Os02t0771700-01	Rice	extracellular	56.04	55.12
EES07606	Sorghum	extracellular, vacuole	56.04	54.79
Zm00001d018214_P001	Maize	extracellular	55.42	54.51
Bra028988.1-P	Field mustard	extracellular, vacuole	63.33	52.87
Solyc11g068440.1.1	Tomato	extracellular	35.21	44.47
HORVU6Hr1G079630.2	Barley	mitochondrion, plastid, vacuole	47.29	41.96
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	42.29	41.18
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	34.17	41.1
Solyc09g057630.2.1	Tomato	nucleus	39.38	40.73
EER99488	Sorghum	extracellular, vacuole	42.08	40.4
HORVU5Hr1G084900.2	Barley	endoplasmic reticulum, extracellular, vacuole	40.21	40.12
TraesCS7B01G285700.2	Wheat	extracellular	46.25	39.71
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	46.46	39.61
TraesCS1B01G454500.1	Wheat	vacuole	46.25	39.57
Solyc12g040860.1.1	Tomato	extracellular, plasma membrane, vacuole	37.5	39.47
Solyc11g071520.1.1	Tomato	extracellular	31.46	39.43
Zm00001d021690_P001	Maize	extracellular	47.92	39.38
Solyc06g076170.2.1	Tomato	extracellular	36.46	38.98
TraesCS1D01G431300.1	Wheat	vacuole	46.25	38.68
Solyc03g082900.2.1	Tomato	extracellular	30.42	38.62
TraesCS1B01G453900.1	Wheat	vacuole	45.83	38.53
TraesCS1A01G422500.1	Wheat	vacuole	45.62	38.42
HORVU1Hr1G092310.2	Barley	extracellular	45.21	38.41
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	31.88	38.15
Solyc07g005330.2.1	Tomato	extracellular	36.46	38.13
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	43.75	38.11
HORVU2Hr1G044460.2	Barley	vacuole	43.75	37.91
HORVU7Hr1G091100.3	Barley	vacuole	44.79	37.85
Solyc01g109570.2.1	Tomato	extracellular	37.29	37.84
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	43.96	37.81
Os07t0538000-01	Rice	extracellular	43.96	37.81
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	43.33	37.75
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	43.12	37.64
Os07t0539400-00	Rice	extracellular, plastid, vacuole	40.83	37.62
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	43.96	37.61
KXG36404	Sorghum	vacuole	44.38	37.57
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	43.75	37.5
HORVU1Hr1G092240.3	Barley	extracellular, vacuole	45.83	37.48
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	43.54	37.46
Solyc06g073710.2.1	Tomato	golgi, mitochondrion, plastid, vacuole	32.08	37.38
EER99489	Sorghum	extracellular, vacuole	45.21	37.35
Solyc12g055840.1.1	Tomato	nucleus	32.71	37.2
Solyc12g008580.1.1	Tomato	extracellular	38.33	37.1
Os07t0539100-01	Rice	extracellular	42.71	37.07
Os08t0244500-00	Rice	extracellular	43.33	36.94
Solyc08g083310.2.1	Tomato	nucleus	32.29	36.64
Os07t0539300-01	Rice	extracellular	43.75	36.4
Solyc07g008150.2.1	Tomato	extracellular, vacuole	29.38	36.15
Solyc12g098560.1.1	Tomato	extracellular	33.33	34.86
Solyc08g005000.2.1	Tomato	extracellular	31.67	34.7
Solyc04g007910.2.1	Tomato	extracellular	36.25	34.46
EER99491	Sorghum	extracellular, vacuole	47.29	34.34
Zm00001d021695_P001	Maize	extracellular	45.62	33.85
Zm00001d006538_P001	Maize	vacuole	45.62	33.74
Solyc04g080260.2.1	Tomato	extracellular	30.42	33.11
Zm00001d021697_P001	Maize	extracellular	47.92	33.09
Os07t0539900-01	Rice	extracellular	41.25	32.89
Solyc05g054440.2.1	Tomato	unclear	35.83	32.7
Solyc02g080660.2.1	Tomato	golgi, plasma membrane, vacuole	26.04	30.27

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:K4DCX7	PFAM:PF00332	PFAM:PF07983	PANTHER:PTHR32227
PANTHER:PTHR32227:SF102	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc12g014420.1	EnsemblPlants:Solyc12g014420.1.1
TMHMM:TMhelix	UniParc:UPI000276A7D8	InterPro:X8	SEG:seg	:	:

Description

No Description!

Coordinates

chr12:+:5390285..5392254

Molecular Weight (calculated)

51459.7 Da

IEP (calculated)

5.513

GRAVY (calculated)

-0.149

Length

480 amino acids

Sequence
(BLAST)

001: MADFTTLTSL FLLLSLLSIA NSGSIGINYG RIANNLPTPS EVVQLLKSQG IHRVKLYDTD SAVLTALSGS NISVSVALPN EQLSDAASKQ SFTDSWVQSN
101: IVRYYPKTNI ESIAVGNEVF VDPNNTTKFL VPAMKNVYAS LVKYGVASSI KVSSPVALSA LQNSYPSSAG SFKTELIEPV IKPMLSFLKQ SGSFLAVNIY
201: PFFAYVANTD TISLDYALFR DNKGVTDPNN GLVYKSLFEA QIDAVYAAMK ALNFDDVKME ITETGWPSKG DENETGASTE NAAAYNGNLV KRVLTGSGTP
301: LKPDEPLNVY LFALFNENQK PGPVSERNYG LFYPSKEKVY DITLTLEGLE AGVNNGSKSQ VVKIPVPSPS SSPSPAPVVG GGVEESKVVN TWCVANEKAG
401: AEKLQAALDY ACGEGGADCR PIQPGATCHN PDTLEAHASY AFNSYYQKKA RGTGTCDFKG AAYVVTQHPK YGSCKFPTGY

Best Arabidopsis Sequence Match ( AT5G55180.1 )
(BLAST)

001: MAVFVLSLLI LSSFSAIPFT YADSGMIGVN YGRIADNLPA PEKVVELLKT QGINRIKLYD TETTVLTALA NSGIKVVVSL PNENLASAAA DQSYTDTWVQ
101: DNIKKYIPAT DIEAIAVGNE VFVDPRNTTT YLVPAMKNVQ SSLVKFNLDK SIKISSPIAL SALASSYPPS AGSFKPELIE PVIKPMLDLL RKTSSHLMVN
201: AYPFFAYAAN ADKISLDYAL FKENAGNVDS GNGLKYNSLL DAQIDAVFAA MSAVGFNDVK LVVTETGWPS AGDENEIGAG SANAAAYNGG LVKRVLTGNG
301: TPLKPKEPLN VYLFALFNEN QKTGPTSERN YGLFYPNENK VYDVSLNGKS TPVNDNKEKV VPVKPSLVGQ TWCVANGKTT KEKLQEGLDY ACGEGGADCR
401: PIQPGATCYN PESLEAHASY AFNSYYQKNA RGVGTCNFGG AAYVVSQPPK YGKCEFPTGH

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4K3D8]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.