Factsheet for Os07t0539100-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 6
endoplasmic reticulum 5
vacuole 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plasma membrane: 18260611
extracellular: 19038476
mitochondrion: 19217306
extracellular: 21255809
extracellular: 21347307
extracellular: 23159799
extracellular: 24083427
extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 21347307 doi

L Zhou, SA Bokhari, CJ Dong, JY Liu

Laboratory of Molecular Biology, School of Life Sciences, Tsinghua University, Beijing, People's Republic of China.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

msms PMID: 21255809 doi

T Shinano, S Komatsu, T Yoshimura, S Tokutake, FJ Kong, T Watanabe, J Wasaki, M Osaki

National Agriculture and Food Research Organization, National Agricultural Research Center for Hokkaido Region, 1-Hitsujigaoka, Toyohira-ku, Sapporo 062-8555, Japan. shinano@affrc.go.jp

msms PMID: 24083427 doi

T Shinano, T Yoshimura, T Watanabe, Y Unno, M Osaki, Y Nanjo, S Komatsu

Agricultural Radiation Research Center, NARO Tohoku Agricultural Research Center , 50, Harajyukuminami, Arai, Fukushima 960-2156, Japan.

msms PMID: 19217306 doi

X Chen, Y Wang, J Li, A Jiang, Y Cheng, W Zhang

Department of Biochemistry and Molecular Biology, Nanjing Agricultural University, Weigang, China.

msms PMID: 19038476 doi

XY Chen, ST Kim, WK Cho, Y Rim, S Kim, SW Kim, KY Kang, ZY Park, JY Kim

Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju 660-701, Republic of Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0539300-01	Rice	extracellular	70.89	67.94
Os08t0244500-00	Rice	extracellular	68.72	67.5
Os07t0538000-01	Rice	extracellular	67.81	67.2
Os07t0539400-00	Rice	extracellular, plastid, vacuole	60.94	64.68
Os07t0539900-01	Rice	extracellular	66.37	60.96
TraesCS7B01G285700.2	Wheat	extracellular	57.5	56.89
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	57.14	56.43
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	55.52	55.72
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	55.33	55.54
HORVU7Hr1G091100.3	Barley	vacuole	56.6	55.11
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	55.88	55.08
HORVU2Hr1G044460.2	Barley	vacuole	55.15	55.05
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	54.43	54.73
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	55.15	54.66
TraesCS1B01G454500.1	Wheat	vacuole	55.33	54.55
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	55.15	54.17
HORVU1Hr1G092310.2	Barley	extracellular	54.79	53.63
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	53.89	53.41
TraesCS1D01G431300.1	Wheat	vacuole	54.97	52.96
KXG36404	Sorghum	vacuole	53.89	52.56
TraesCS1B01G453900.1	Wheat	vacuole	54.25	52.54
TraesCS1A01G422500.1	Wheat	vacuole	52.62	51.05
HORVU1Hr1G092240.3	Barley	extracellular, vacuole	54.07	50.94
Zm00001d021690_P001	Maize	extracellular	52.44	49.66
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	44.12	49.49
EER99489	Sorghum	extracellular, vacuole	51.9	49.4
Os02t0771700-01	Rice	extracellular	43.22	48.98
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	36.17	48.9
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	35.44	48.88
HORVU5Hr1G084900.2	Barley	endoplasmic reticulum, extracellular, vacuole	41.59	47.82
EER99488	Sorghum	extracellular, vacuole	43.04	47.6
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	36.17	47.51
CDY17308	Canola	extracellular, vacuole	37.79	46.55
CDY20780	Canola	extracellular, vacuole	37.61	46.33
CDY06601	Canola	endoplasmic reticulum, extracellular	37.25	45.88
CDX92794	Canola	endoplasmic reticulum, extracellular	37.25	45.68
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	37.79	45.53
CDY36734	Canola	extracellular, vacuole	37.79	45.43
Bra035561.1-P	Field mustard	extracellular, vacuole	37.79	45.43
CDY18049	Canola	extracellular, vacuole	36.17	45.25
EER99491	Sorghum	extracellular, vacuole	54.07	45.23
CDY19908	Canola	extracellular, vacuole	37.43	45.1
CDY12009	Canola	extracellular, vacuole	37.43	45.0
CDY46679	Canola	extracellular, vacuole	36.17	44.84
CDY56498	Canola	extracellular, vacuole	35.8	44.8
Bra002927.1-P	Field mustard	extracellular, vacuole	37.43	44.71
KRH14333	Soybean	endoplasmic reticulum, extracellular	37.25	44.69
PGSC0003DMT400001833	Potato	extracellular, vacuole	37.79	44.66
Solyc07g049370.2.1	Tomato	extracellular, vacuole	37.79	44.66
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	37.97	44.59
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	37.43	44.52
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	37.61	44.16
KRH73795	Soybean	extracellular, vacuole	37.61	44.07
AT2G05790.1	Thale cress	extracellular, vacuole	37.43	43.86
PGSC0003DMT400033482	Potato	extracellular, vacuole	37.25	43.46
Bra015166.1-P	Field mustard	extracellular, vacuole	36.89	43.13
KRH73361	Soybean	extracellular, vacuole	36.71	43.01
Zm00001d006538_P001	Maize	vacuole	50.45	42.99
Solyc12g014420.1.1	Tomato	extracellular	37.07	42.71
Zm00001d021695_P001	Maize	extracellular	49.91	42.66
KRH14776	Soybean	extracellular, vacuole	36.71	42.56
Zm00001d021697_P001	Maize	extracellular	53.35	42.45
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	36.71	41.18
PGSC0003DMT400033484	Potato	extracellular, vacuole	28.57	39.6
Bra028988.1-P	Field mustard	extracellular, vacuole	37.25	35.83
Os03t0669300-02	Rice	endoplasmic reticulum	30.02	35.78
Os01t0860800-01	Rice	extracellular	25.14	34.92
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	28.93	34.33
Os01t0739700-01	Rice	plasma membrane	30.38	34.08
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	24.05	34.02
Os03t0246100-01	Rice	extracellular, vacuole	26.4	33.95
Os04t0681950-00	Rice	vacuole	27.49	33.7
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	30.2	33.13
Os10t0160100-01	Rice	extracellular, vacuole	24.77	32.62
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	24.95	32.55
Os09t0502200-01	Rice	extracellular	28.21	32.5
Os11t0704600-01	Rice	extracellular	27.49	32.2
Os07t0577300-01	Rice	extracellular	28.75	31.93
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	23.33	31.7
Os06t0131500-01	Rice	plastid	25.32	31.18
Os03t0845600-01	Rice	extracellular, vacuole	26.22	30.59
Os07t0510200-01	Rice	plasma membrane	29.48	30.19
Os03t0227400-01	Rice	plasma membrane	19.53	29.59
Os06t0607000-01	Rice	plasma membrane	25.5	29.25
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	23.69	29.24
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	26.4	29.14
Os06t0531000-00	Rice	vacuole	23.51	26.21
Os04t0682050-01	Rice	plasma membrane	5.61	11.74
Os04t0681900-02	Rice	endoplasmic reticulum	5.42	8.93

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	EntrezGene:4343487	MapMan:50.3.2	EMBL:AK062569	EMBL:AK067173
ProteinID:BAC84500.1	ProteinID:BAF21797.1	ProteinID:BAT01947.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:Os07g0539100	EnsemblPlants:Os07t0539100-01	PFAM:PF00332	PFAM:PF07983
PANTHER:PTHR32227	PANTHER:PTHR32227:SF235	UniProt:Q6YVU7	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM
UniParc:UPI00001BF6EF	InterPro:X8	RefSeq:XP_015647554.1	RefSeq:XP_015647555.1	SEG:seg	:

Description

beta-1, 3-glucanase 11Glycoside hydrolase, family 17 protein. (Os07t0539100-01);Glycoside hydrolase, family 17 protein. (Os07t0539100-02)

Coordinates

chr7:-:21223274..21225870

Molecular Weight (calculated)

58548.3 Da

IEP (calculated)

4.786

GRAVY (calculated)

0.019

Length

553 amino acids

Sequence
(BLAST)

001: MAVNHKLSAL LVATALPLLL LSTADAGEIG VCYGRDASNL IDPPEVVKLL NANSITMVRI YDTDPTVLNA LANTGIKVMV MLPNKDLASA GADVGSATNW
101: VKNNVVPYLN QGTLINGVAV GNEVFKQQPE LTGMLVSAMQ NVQMALANLN LADGIKVSTP IAFDALDVSF PPSDGRFKDS IAQSVMKPMI DFLVRTGSYL
201: LVNLYPMYAA ADPSTHISIE YATFRPNSGV LDEKTGIMYF SLFDAELDAV YAAISKVSGG SLRASLAQGD QMLVQVAETG HSSGNTFGGP VVVEADADLN
301: AIATIPNAKA YNNGLIRRVL SGSPGKHDVS AYIFSLFNEN LKPGPATEGH FGLFYPNGQQ VYEVNFQGGR SPCPTNASWC VANPNVDNAA LQRALDWACN
401: NGADCSAIQL GKACYEPNTL VAHASYAFND YYQRKGQASG TCNFNGVAFI VYKPSPSICD PNPSWCVAKD SVGEAQLQNA LDYACGSCAD CSAIQRGAQC
501: FNPDTKVAHA TYAFNDYYQT AGRASGSCDF AGAATIVTQQ PKIGNCLLPP NNA

Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)

001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.