Factsheet for Os04t0681900-02

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum

Predictor Summary:

nucleus 2
peroxisome 1
extracellular 4
golgi 4
plasma membrane 4
endoplasmic reticulum 6
vacuole 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum

endoplasmic reticulum: 24738983
endoplasmic reticulum: 25763631

plasma membrane: 18260611

gfp PMID: 24738983 doi

W Meng, AS Hsiao, C Gao, L Jiang, ML Chye

School of Biological Sciences, The University of Hong Kong, Pokfulam, Hong Kong, China; College of Life Science, Northeast Forestry University, Harbin, China.

gfp PMID: 25763631 doi

W Meng, ML Chye

School of Biological Sciences; The University of Hong Kong; Pokfulam, Hong Kong, PR China.

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0669300-02	Rice	endoplasmic reticulum	9.52	6.9
Os11t0704600-01	Rice	extracellular	9.52	6.78
Os09t0502200-01	Rice	extracellular	9.23	6.46
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	9.52	6.35
Os03t0845600-01	Rice	extracellular, vacuole	8.63	6.12
Os07t0538000-01	Rice	extracellular	10.12	6.09
Os04t0681950-00	Rice	vacuole	8.04	5.99
KRG89415	Soybean	extracellular, vacuole	6.25	5.85
Os02t0771700-01	Rice	extracellular	8.33	5.74
Os08t0244500-00	Rice	extracellular	9.52	5.68
Os07t0539400-00	Rice	extracellular, plastid, vacuole	8.63	5.57
Os07t0539300-01	Rice	extracellular	9.52	5.55
Os07t0539900-01	Rice	extracellular	9.82	5.48
Os07t0539100-01	Rice	extracellular	8.93	5.42
Os01t0739700-01	Rice	plasma membrane	7.44	5.07
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	6.85	4.94
Os07t0577300-01	Rice	extracellular	6.85	4.62
Os07t0510200-01	Rice	plasma membrane	7.14	4.44
Os06t0131500-01	Rice	plastid	4.17	3.12
Os07t0240200-01	Rice	endoplasmic reticulum, extracellular, plasma membrane	4.46	2.99
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	3.87	2.9
Os03t0227400-01	Rice	plasma membrane	2.38	2.19
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	2.08	1.65
Os01t0860800-01	Rice	extracellular	1.79	1.51
Os04t0412300-01	Rice	plasma membrane, plastid, vacuole	1.79	1.47
Os02t0532900-01	Rice	endoplasmic reticulum, extracellular	1.49	1.28
Os06t0607000-01	Rice	plasma membrane	1.79	1.24
Os06t0531000-00	Rice	vacuole	1.79	1.21
Os04t0682050-01	Rice	plasma membrane	0.89	1.14
Os10t0160100-01	Rice	extracellular, vacuole	1.19	0.95
Os03t0246100-01	Rice	extracellular, vacuole	1.19	0.93
AT3G46570.1	Thale cress	vacuole	0.89	0.84

Protein Annotations

Gene3D:1.20.80.10	Gene3D:1.25.40.20	MapMan:35.1	EntrezGene:4337434	UniProt:A3AYR1	InterPro:Acyl-CoA-binding_protein
InterPro:Acyl-CoA-binding_sf	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ProteinID:BAF16206.1	ProteinID:BAS91681.1
ProteinID:CAE03429.1	ProteinID:EAZ32450.1	InterPro:FERM/acyl-CoA-bd_prot_sf	GO:GO:0000062	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005789	GO:GO:0008289	GO:GO:0016020	GO:GO:0016021	InterPro:IPR000582	InterPro:IPR002110
InterPro:IPR014352	InterPro:IPR020683	InterPro:IPR036770	EnsemblPlantsGene:Os04g0681900	EnsemblPlants:Os04t0681900-02	PFAM:PF00887
PFAM:PF12796	PRINTS:PR00689	PRINTS:PR01415	PFscan:PS50088	PFscan:PS50297	PFscan:PS51228
PANTHER:PTHR24119	PANTHER:PTHR24119:SF0	SMART:SM00248	SUPFAM:SSF47027	SUPFAM:SSF48403	TMHMM:TMhelix
UniParc:UPI0000F18BB3	RefSeq:XP_015637218.1	SEG:seg	:	:	:

Description

Acyl-CoA-binding protein 4Similar to H0124B04.8 protein. (Os04t0681900-01);Acyl-CoA-binding protein , Stress response (Os04t0681900-02)

Coordinates

chr4:-:34810656..34813508

Molecular Weight (calculated)

35902.5 Da

IEP (calculated)

4.227

GRAVY (calculated)

-0.355

Length

336 amino acids

Sequence
(BLAST)

001: MGGDWQELAQ AAVIGLLFAF LVAKLISTVI AFKEDNLRIT RSTPTSPSAA DTPAAPAPPP ASLDGGHGDT SDGSGSDSDS DWEGVESTEL DEEFSAASAF
101: VAASAASGTS VPEQAQLQLY GLYKIATEGP CTAPQPSALK LKARAKWNAW HKLGAMPTEE AMQKYITVVD ELFPNWSMGS STKRKDEDTT VSASSSKGPM
201: GPVFSSLMYE EEDQGNDSEL GDIHVSAREG AIDDIAKHLA AGVEVNMRDS EGRTPLHWAV DRGHLNSVEI LVNANADVNA QDNEGQTALH YAVLCEREDI
301: AELLVKHHAD VQIKDEDGNT VRELCPSSWS FMNLAN

Best Arabidopsis Sequence Match ( AT4G27780.1 )
(BLAST)

001: MGDWAQLAQS VILGLIFSYL LAKLISIVVT FKEDNLSLTR HPEESQLEIK PEGVDSRRLD SSCGGFGGEA DSLVAEQGSS RSDSVAGDDS EEDDDWEGVE
101: STELDEAFSA ATLFVTTAAA DRLSQKVPSD VQQQLYGLYK IATEGPCTAP QPSALKMTAR AKWQAWQKLG AMPPEEAMEK YIEIVTQLYP TWLDGGVKAG
201: SRGGDDAASN SRGTMGPVFS SLVYDEESEN ELKIDAIHGF AREGEVENLL KSIESGIPVN ARDSEGRTPL HWAIDRGHLN IAKVLVDKNA DVNAKDNEGQ
301: TPLHYAVVCD REAIAEFLVK QNANTAAKDE DGNSPLDLCE SDWPWIRDSA KQAD

Arabidopsis Description

ACBP2AtACBP2 [Source:UniProtKB/TrEMBL;Acc:A0A178V3N7]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.