Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- vacuole 2
- extracellular 2
- endoplasmic reticulum 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
|
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER88625 | Sorghum | extracellular, plasma membrane, vacuole | 67.43 | 82.91 |
| Zm00001d046534_P001 | Maize | plasma membrane | 66.81 | 81.73 |
| TraesCS7A01G378100.1 | Wheat | golgi, vacuole | 66.18 | 79.95 |
| TraesCS7B01G279900.1 | Wheat | golgi, vacuole | 64.73 | 78.2 |
| HORVU0Hr1G021950.4 | Barley | golgi, vacuole | 63.9 | 77.0 |
| TraesCS7D01G374900.1 | Wheat | plastid, vacuole | 67.63 | 73.76 |
| GSMUA_AchrUn_... | Banana | cytosol | 39.63 | 64.31 |
| KRH20124 | Soybean | golgi, vacuole | 48.96 | 60.82 |
| Os02t0200300-02 | Rice | golgi, mitochondrion, vacuole | 53.32 | 60.61 |
| CDY38531 | Canola | golgi, vacuole | 47.1 | 59.42 |
| CDX83243 | Canola | vacuole | 46.47 | 59.26 |
| GSMUA_Achr7P13110_001 | Banana | golgi, vacuole | 41.08 | 59.1 |
| AT2G26600.1 | Thale cress | endoplasmic reticulum, golgi, vacuole | 47.3 | 58.76 |
| Bra000536.1-P | Field mustard | golgi, plasma membrane, vacuole | 46.06 | 58.73 |
| PGSC0003DMT400079432 | Potato | extracellular, vacuole | 47.51 | 58.72 |
| Solyc07g008150.2.1 | Tomato | extracellular, vacuole | 47.1 | 58.21 |
| VIT_11s0016g05560.t01 | Wine grape | golgi, vacuole | 46.89 | 57.36 |
| KRH03678 | Soybean | golgi, mitochondrion, plasma membrane, plastid, vacuole | 48.96 | 56.46 |
| Os01t0860800-01 | Rice | extracellular | 35.27 | 42.71 |
| Os02t0532900-01 | Rice | endoplasmic reticulum, extracellular | 33.82 | 41.69 |
| Os04t0412300-01 | Rice | plasma membrane, plastid, vacuole | 33.61 | 39.8 |
| GSMUA_Achr5P05970_001 | Banana | plasma membrane, plastid, vacuole | 41.49 | 38.99 |
| Os03t0227400-01 | Rice | plasma membrane | 27.18 | 35.89 |
| Os10t0160100-01 | Rice | extracellular, vacuole | 30.91 | 35.48 |
| Os06t0131500-01 | Rice | plastid | 32.57 | 34.97 |
| Os03t0246100-01 | Rice | extracellular, vacuole | 30.71 | 34.42 |
| Os02t0771700-01 | Rice | extracellular | 32.37 | 31.97 |
| Os06t0531000-00 | Rice | vacuole | 31.95 | 31.05 |
| Os03t0722500-01 | Rice | extracellular, plasma membrane, vacuole | 28.42 | 30.58 |
| Os03t0669300-02 | Rice | endoplasmic reticulum | 29.25 | 30.39 |
| Os01t0739700-01 | Rice | plasma membrane | 30.08 | 29.41 |
| Os08t0525800-00 | Rice | extracellular, mitochondrion, vacuole | 27.18 | 28.11 |
| Os04t0681950-00 | Rice | vacuole | 25.52 | 27.27 |
| Os11t0704600-01 | Rice | extracellular | 26.14 | 26.69 |
| Os09t0502200-01 | Rice | extracellular | 26.14 | 26.25 |
| Os03t0845600-01 | Rice | extracellular, vacuole | 25.31 | 25.74 |
| Os03t0221500-01 | Rice | extracellular, plasma membrane, vacuole | 26.76 | 25.6 |
| Os07t0539100-01 | Rice | extracellular | 29.25 | 25.5 |
| Os07t0538000-01 | Rice | extracellular | 29.46 | 25.45 |
| Os07t0577300-01 | Rice | extracellular | 26.14 | 25.3 |
| Os07t0240200-01 | Rice | endoplasmic reticulum, extracellular, plasma membrane | 25.93 | 24.95 |
| Os07t0539300-01 | Rice | extracellular | 28.01 | 23.4 |
| Os08t0244500-00 | Rice | extracellular | 27.18 | 23.27 |
| Os07t0539400-00 | Rice | extracellular, plastid, vacuole | 24.07 | 22.26 |
| Os07t0510200-01 | Rice | plasma membrane | 24.9 | 22.22 |
| Os07t0539900-01 | Rice | extracellular | 27.18 | 21.76 |
| Os04t0682050-01 | Rice | plasma membrane | 7.26 | 13.26 |
| Os04t0681900-02 | Rice | endoplasmic reticulum | 1.24 | 1.79 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | UniProt:A0A0P0WYH6 | ProteinID:BAS98539.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 |
| GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | EnsemblPlantsGene:Os06g0607000 |
| EnsemblPlants:Os06t0607000-01 | PFAM:PF00332 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF47 | SUPFAM:SSF51445 | TMHMM:TMhelix |
| UniParc:UPI000393B325 | SEG:seg | : | : | : | : |
Description
Similar to Beta-1,3-glucanase. (Os06t0607000-01)
Coordinates
chr6:+:24127167..24130368
Molecular Weight (calculated)
53332.0 Da
IEP (calculated)
9.130
GRAVY (calculated)
-0.115
Length
482 amino acids
Sequence
(BLAST)
(BLAST)
001: LVGGGRDPVL ADSLPFLVNP WRRRRAKIAR RCSAVAERWS VYGTCRRGAM PRPGTEATTT TTSGCEADCG VPAMKATLMM MSCRSRSRSG RAHWMLLLFC
101: LLLAFPSHGP RAVEAFPGGY GINYGRIANN IPSPDKVVQL LRASKIRNVK IYDSDHSVLD AFKGSGLNLV IAIPNELVKD FAANESRSID WLNENVQPYL
201: PQTRIVGITV GNEVLGGQDT SLAEPLVQAV KNVYNGLKKF HLQDKIELFT PHSEAVFATS YPPSACVFKE DVMVYMKPLL DFFQQIGSPF YVNAYPFLAY
301: ISDPEHIDIN YALFKPNPGI VDPNTSLHYD NMFDAQIDAA YAALQAAGYR DMEVRVAETG WASSGDQTEA GASVENARTY NFNLRKRLFL RKGTPLKPKR
401: PVKAYIFALF NENSKPGPSS ERHYGLFNAD GRIAYDIGYE GLLPSSAPSY FLSLRKIQAG GWIVHYSATV ILSVFIFLAL VT
101: LLLAFPSHGP RAVEAFPGGY GINYGRIANN IPSPDKVVQL LRASKIRNVK IYDSDHSVLD AFKGSGLNLV IAIPNELVKD FAANESRSID WLNENVQPYL
201: PQTRIVGITV GNEVLGGQDT SLAEPLVQAV KNVYNGLKKF HLQDKIELFT PHSEAVFATS YPPSACVFKE DVMVYMKPLL DFFQQIGSPF YVNAYPFLAY
301: ISDPEHIDIN YALFKPNPGI VDPNTSLHYD NMFDAQIDAA YAALQAAGYR DMEVRVAETG WASSGDQTEA GASVENARTY NFNLRKRLFL RKGTPLKPKR
401: PVKAYIFALF NENSKPGPSS ERHYGLFNAD GRIAYDIGYE GLLPSSAPSY FLSLRKIQAG GWIVHYSATV ILSVFIFLAL VT
001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.