Factsheet for VIT_11s0016g05560.t01

Subcellular Localization

min:

: max

Winner_takes_all: golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, vacuole
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20124	Soybean	golgi, vacuole	70.3	71.39
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	65.99	67.01
PGSC0003DMT400079432	Potato	extracellular, vacuole	66.24	66.92
CDX83243	Canola	vacuole	63.96	66.67
Solyc07g008150.2.1	Tomato	extracellular, vacuole	65.74	66.41
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	70.3	66.27
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	63.45	66.14
CDY38531	Canola	golgi, vacuole	63.71	65.71
VIT_09s0002g06880.t01	Wine grape	vacuole	66.24	65.41
GSMUA_AchrUn_...	Banana	cytosol	48.98	64.98
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	51.52	60.6
EER88625	Sorghum	extracellular, plasma membrane, vacuole	56.35	56.63
Zm00001d046534_P001	Maize	plasma membrane	54.82	54.82
TraesCS7A01G378100.1	Wheat	golgi, vacuole	54.31	53.63
TraesCS7B01G279900.1	Wheat	golgi, vacuole	54.31	53.63
HORVU0Hr1G021950.4	Barley	golgi, vacuole	53.3	52.5
TraesCS7D01G374900.1	Wheat	plastid, vacuole	54.57	48.64
Os06t0607000-01	Rice	plasma membrane	57.36	46.89
VIT_02s0025g02770.t01	Wine grape	extracellular	42.89	41.73
VIT_10s0003g03690.t01	Wine grape	extracellular	38.32	40.27
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	40.61	39.02
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	48.22	37.04
VIT_06s0004g04750.t01	Wine grape	extracellular	31.47	34.44
VIT_16s0098g01560.t01	Wine grape	extracellular	37.31	31.89
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	38.07	31.85
VIT_18s0122g00980.t01	Wine grape	extracellular	35.79	30.65
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	36.29	30.36
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	35.79	30.32
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	37.31	30.0
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	33.76	29.75
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	36.8	29.35
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	33.25	28.05
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	35.03	27.71
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	33.25	27.7
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	33.76	26.92
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	32.23	22.4

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100262905	wikigene:100262905	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CCB51598
ProteinID:CCB51598.1	UniProt:F6HHA2	EMBL:FN595756	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247
GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100262905	wikigene:LOC100262905	PFAM:PF00332
PANTHER:PTHR32227	PANTHER:PTHR32227:SF47	SUPFAM:SSF51445	TIGR:TC63872	TMHMM:TMhelix	UniParc:UPI00019844E0
ArrayExpress:VIT_11s0016g05560	EnsemblPlantsGene:VIT_11s0016g05560	EnsemblPlants:VIT_11s0016g05560.t01	unigene:Vvi.12993	RefSeq:XP_002282272	RefSeq:XP_002282272.1

Description

No Description!

Coordinates

chr11:-:4949818..4954844

Molecular Weight (calculated)

43858.5 Da

IEP (calculated)

8.653

GRAVY (calculated)

-0.058

Length

394 amino acids

Sequence
(BLAST)

001: MKSWRFFYRF LRVFFIVFAM NGSLTVQAFT GTYGINYGRI ADNIPSPDEV VTLLRALKIK NVRIYDADHS VLEAFSGTGL EIVVGVPNGN LKDMNASEDH
101: ALSWVKENVQ SFLPDTHIRG IAVGNEVLGG DQELWGVLLG AVKNVHKALE KFHLTDLIQV STAHSQAVLS NSYPPSSCIF NQNIVQYMKP LLEFFSEIHS
201: PFCLNAYPFL DYMGDPANID INYALFQSTQ GIYDTKAKLH YDNMLDAQID AAYAALENSG FKKMEVIITE TGWASRGDEN EAAATSTNAR TYNYNLRKRL
301: AKKKGTPLRP KNVVKAYIFA VFNENLKPGP TSERNFGLFK ADGSISYDIG FKGLKSSATS SILSLKKIRA QDWSASYSLV FTACAAVLLL FLRL

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.