Factsheet for VIT_16s0098g01560.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
golgi 5
plasma membrane 6
endoplasmic reticulum 6
vacuole 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082900.2.1	Tomato	extracellular	56.83	69.31
PGSC0003DMT400047660	Potato	extracellular	56.83	68.59
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	62.26	63.92
AT5G24318.1	Thale cress	extracellular	62.04	62.45
CDX87130	Canola	vacuole	62.69	62.15
CDY19838	Canola	extracellular, vacuole	62.26	61.46
KRH52523	Soybean	extracellular, plasma membrane, vacuole	45.77	60.98
HORVU2Hr1G102010.1	Barley	golgi, mitochondrion, vacuole	43.82	57.39
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	54.45	56.15
TraesCS2D01G436800.1	Wheat	vacuole	47.94	56.09
EES13119	Sorghum	extracellular, vacuole	55.1	54.74
TraesCS2B01G459400.1	Wheat	extracellular	54.23	54.35
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	52.93	54.22
TraesCS2A01G439500.1	Wheat	extracellular	53.58	53.7
Os04t0681950-00	Rice	vacuole	51.63	52.77
VIT_06s0004g04750.t01	Wine grape	extracellular	36.23	46.39
GSMUA_Achr3P14330_001	Banana	cytosol, plasma membrane, vacuole	50.54	46.14
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	45.99	45.59
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	46.64	43.88
VIT_18s0122g00980.t01	Wine grape	extracellular	41.0	41.09
VIT_10s0003g03690.t01	Wine grape	extracellular	33.41	41.07
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	41.87	40.98
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	41.0	40.13
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	34.06	38.29
VIT_02s0025g02770.t01	Wine grape	extracellular	33.62	38.27
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	31.89	37.31
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	39.26	36.35
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	38.39	35.83
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	36.23	35.76
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	37.53	35.02
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	35.79	34.88
VIT_09s0002g06880.t01	Wine grape	vacuole	30.15	34.84
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	35.79	29.1

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100262327	wikigene:100262327	EntrezGene:104882241	Gene3D:3.20.20.80	MapMan:50.3.2
ProteinID:CBI23036	ProteinID:CBI23036.3	UniProt:E0CV75	EMBL:FN595247	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0030246
GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100262327	wikigene:LOC100262327
PFAM:PF00332	PFAM:PF07983	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF92	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI0001BE1FBC	ArrayExpress:VIT_16s0098g01560	EnsemblPlantsGene:VIT_16s0098g01560	EnsemblPlants:VIT_16s0098g01560.t01
InterPro:X8	RefSeq:XP_002271991	RefSeq:XP_002271991.2	RefSeq:XP_010662898.1	SEG:seg	:

Description

No Description!

Coordinates

chr16:+:21731310..21733294

Molecular Weight (calculated)

50129.9 Da

IEP (calculated)

4.982

GRAVY (calculated)

-0.042

Length

461 amino acids

Sequence
(BLAST)

001: METAIAAVLL LASVFFQGVV EGNIGVNYGT VANDLPPPSE VARFLLESTT INRVRMFDAD PEMIQAFAHT GIAVTVTVPN ELIPRLTKLS FAQQWVKTNV
101: QPYVPATNLI RILVGNEVLS TANKLLIAGL VPAMQTLHTA LAAVSLDRRI KVSTPHSLGI LSTSSPPSTG RFRQGYDVHV IKPLLSFLRA TNSPFMINPY
201: PFFGYSAETL DYALFRPNSG VLDENTQRVY TNMLDAQLDA VFSAMKILGF TDVEIVIAET GWPSDGDEGQ VGVNAESAAE YNGNLREHVM SGVGTPLMPN
301: RTFETYIFAL FNENLKPGPL CERNFGLFQP DLTPVYDIGI MRPTARASIP WNPAPAAAPQ LGPAPQQHPK GGKQWCLPTS DAHSDALQKN IDYVCGLGLD
401: CKPIQEGGAC FIPDTVRAHA AYAMNAYYQT TGGSEYDCDF EQTGALTDVD PSYGRCKYLG R

Best Arabidopsis Sequence Match ( AT5G24318.1 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT FRSSDPVYNP RSPVRGSSSK RWCVTKAGAE TVALQRNIDY VCGLGLDCRP
401: INEGGLCYLP NTVKAHSKYA MNLYYQTMEK HEFDCDFDNT GEITTIDPSY GNCEYQAN

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.