Factsheet for PGSC0003DMT400047660

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
golgi 5
plasma membrane 5
endoplasmic reticulum 5
vacuole 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc03g082900.2.1	Tomato	extracellular	96.07	97.09
KRH52523	Soybean	extracellular, plasma membrane, vacuole	53.14	58.67
VIT_16s0098g01560.t01	Wine grape	extracellular	68.59	56.83
Bra036510.1-P	Field mustard	cytoskeleton, extracellular, plastid, vacuole	58.12	49.44
AT5G24318.1	Thale cress	extracellular	59.16	49.34
CDX87130	Canola	vacuole	58.38	47.96
CDY19838	Canola	extracellular, vacuole	58.12	47.54
PGSC0003DMT400078179	Potato	extracellular	52.36	44.64
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	48.43	41.11
EES13119	Sorghum	extracellular, vacuole	49.21	40.52
TraesCS2A01G439500.1	Wheat	extracellular	47.91	39.78
TraesCS2B01G459400.1	Wheat	extracellular	47.91	39.78
Os04t0681950-00	Rice	vacuole	46.6	39.47
TraesCS2D01G436800.1	Wheat	vacuole	40.58	39.34
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	39.27	39.16
HORVU2Hr1G102010.1	Barley	golgi, mitochondrion, vacuole	35.6	38.64
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	34.55	37.08
PGSC0003DMT400013154	Potato	extracellular, vacuole	42.67	36.96
PGSC0003DMT400008245	Potato	vacuole	44.24	36.58
PGSC0003DMT400012898	Potato	cytosol	38.74	36.01
GSMUA_Achr3P14330_001	Banana	cytosol, plasma membrane, vacuole	47.38	35.84
PGSC0003DMT400033484	Potato	extracellular, vacuole	37.43	35.84
PGSC0003DMT400001908	Potato	extracellular	43.46	35.32
PGSC0003DMT400031570	Potato	extracellular, vacuole	37.7	34.62
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	33.51	34.5
PGSC0003DMT400060499	Potato	extracellular	45.29	34.33
PGSC0003DMT400001833	Potato	extracellular, vacuole	40.58	33.12
PGSC0003DMT400079432	Potato	extracellular, vacuole	33.77	33.08
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	37.96	31.8
PGSC0003DMT400033482	Potato	extracellular, vacuole	37.7	30.38
PGSC0003DMT400075818	Potato	extracellular	39.79	30.1
PGSC0003DMT400022520	Potato	extracellular, vacuole	35.86	29.53
PGSC0003DMT400000943	Potato	extracellular, vacuole	38.22	29.44
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	34.82	25.38
PGSC0003DMT400081837	Potato	extracellular	31.15	23.9
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	35.08	23.72

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:102594231	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	GO:GO:0016798
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M1BL74	PFAM:PF00332	EnsemblPlantsGene:PGSC0003DMG400018523	PGSC:PGSC0003DMG400018523
EnsemblPlants:PGSC0003DMT400047660	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF62	SUPFAM:SSF51445	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI000296735C	RefSeq:XP_006350517.1	SEG:seg	:	:

Description

Glucan endo-1,3-beta-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400018523]

Coordinates

chr3:+:48100709..48102877

Molecular Weight (calculated)

42139.2 Da

IEP (calculated)

5.164

GRAVY (calculated)

0.191

Length

382 amino acids

Sequence
(BLAST)

001: MDKVFNTPLA HLLGALLVLL APIFLQGVEG TIGVNYGTVA DDLPPPVQVA SFLRDSTFIR RVRLFDANPE ILKAFARTGI SVTVNVPNDL IPQLTMLSFA
101: QQWVEINVLP YVPATNIVRI LVGNEVISTA NKLLIVSLVP AMETLQAALV EKSLDRHIRI STPHFLGILS NSSPPSTGKF RPGYDIHVLK PLLEFLRATN
201: SPFMINPYPF FDSSDNTLDY ALFRPNPGVF DETTQLTYTN MLDAQLDAVF SALKLLDFED IEIVIAETGW PSRGDPGQAG VDTGIAAEYN KKLIQHVMSG
301: IGTPLMPNRT FETYIFALFN EDLKPGPTCE RNFGLFKPDM TPVYDIGIVH PRVANAAANT DHSHTNSRTN LLLLLLVCLM CF

Best Arabidopsis Sequence Match ( AT5G24318.4 )
(BLAST)

001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT VINHRRNSQH YLVSYMLTNL FL

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.