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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • extracellular 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, extracellular, mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:extracellular
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc12g055840.1.1 Tomato nucleus 88.08 85.78
PGSC0003DMT400031570 Potato extracellular, vacuole 72.02 71.15
VIT_02s0025g02770.t01 Wine grape extracellular 63.75 64.69
KRH34248 Soybean extracellular, plasma membrane, vacuole 60.34 59.9
Bra023293.1-P Field mustard extracellular 56.2 55.8
CDX93815 Canola extracellular 55.96 55.56
CDY69080 Canola extracellular 56.2 55.26
AT5G42100.1 Thale cress extracellular, vacuole 56.2 54.35
AT1G32860.1 Thale cress extracellular, plasma membrane, vacuole 55.96 53.99
CDY13362 Canola extracellular, vacuole 54.01 53.62
Bra028526.1-P Field mustard extracellular, vacuole 54.99 52.56
CDX67530 Canola extracellular 54.26 52.22
PGSC0003DMT400067771 Potato extracellular, plasma membrane, vacuole 47.93 51.44
TraesCS1A01G055900.1 Wheat extracellular 32.6 46.37
Zm00001d028410_P001 Maize vacuole 40.39 45.98
PGSC0003DMT400048136 Potato cytosol, plastid, vacuole 38.44 44.38
Zm00001d030361_P001 Maize plasma membrane 43.55 44.31
TraesCS1A01G049800.1 Wheat extracellular, vacuole 43.31 43.84
TraesCS4A01G067900.1 Wheat vacuole 44.53 43.78
TraesCS7A01G069700.1 Wheat extracellular, vacuole 45.5 43.59
TraesCS4D01G225700.1 Wheat vacuole 44.28 43.54
TraesCS4B01G225100.1 Wheat vacuole 44.28 43.54
TraesCS1D01G056500.1 Wheat extracellular, vacuole 42.82 43.46
TraesCS1B01G072500.1 Wheat extracellular, vacuole 42.82 43.35
Os10t0160100-01 Rice extracellular, vacuole 44.28 43.33
HORVU1Hr1G010910.2 Barley extracellular, vacuole 43.31 43.2
TraesCS1B01G072600.1 Wheat endoplasmic reticulum, extracellular, vacuole 42.34 43.18
TraesCSU01G153100.1 Wheat extracellular, vacuole 45.01 43.12
HORVU4Hr1G063240.7 Barley golgi, vacuole 45.26 42.96
TraesCS7D01G065400.1 Wheat extracellular, vacuole 44.77 42.89
Os03t0246100-01 Rice extracellular, vacuole 44.28 42.33
PGSC0003DMT400015234 Potato cytosol, peroxisome, plastid 37.96 42.05
Zm00001d036051_P001 Maize extracellular, vacuole 43.31 41.78
GSMUA_Achr11P... Banana extracellular, plasma membrane, vacuole 40.15 41.67
Os06t0131500-01 Rice plastid 45.26 41.43
HORVU1Hr1G011210.1 Barley vacuole 42.82 40.93
KXG38664 Sorghum extracellular, vacuole 43.07 40.78
PGSC0003DMT400079432 Potato extracellular, vacuole 37.47 39.49
HORVU7Hr1G012550.1 Barley vacuole 42.82 39.37
KXG19201 Sorghum plastid 44.28 39.22
PGSC0003DMT400033484 Potato extracellular, vacuole 37.71 38.85
PGSC0003DMT400047660 Potato extracellular 36.01 38.74
TraesCS1A01G046000.1 Wheat extracellular, vacuole 31.39 35.54
PGSC0003DMT400013154 Potato extracellular, vacuole 36.5 34.01
PGSC0003DMT400001908 Potato extracellular 38.2 33.4
PGSC0003DMT400033482 Potato extracellular, vacuole 38.2 33.12
PGSC0003DMT400001833 Potato extracellular, vacuole 37.47 32.91
PGSC0003DMT400037469 Potato plasma membrane, vacuole 36.25 32.68
PGSC0003DMT400078179 Potato extracellular 35.04 32.14
PGSC0003DMT400000943 Potato extracellular, vacuole 35.52 29.44
PGSC0003DMT400008245 Potato vacuole 32.6 29.0
PGSC0003DMT400022520 Potato extracellular, vacuole 31.14 27.59
PGSC0003DMT400081837 Potato extracellular 32.12 26.51
PGSC0003DMT400075818 Potato extracellular 32.36 26.34
PGSC0003DMT400060499 Potato extracellular 31.39 25.6
PGSC0003DMT400042484 Potato extracellular, plasma membrane, vacuole 31.39 24.62
PGSC0003DMT400040463 Potato mitochondrion, vacuole 30.9 22.48
OQU92921 Sorghum mitochondrion 44.77 16.82
Protein Annotations
EnsemblPlants:PGSC0003DMT400012898EnsemblPlantsGene:PGSC0003DMG400005021Gene3D:3.20.20.80GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39PANTHER:PTHR32227PANTHER:PTHR32227:SF236PFAM:PF00332PGSC:PGSC0003DMG400005021SEG:seg
SUPFAM:SSF51445UniParc:UPI000295AD4AUniProt:M1A1Z2MapMan:50.3.2::
Description
Glucan endo-1,3-beta-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400005021]
Coordinates
chr12:+:53447390..53448783
Molecular Weight (calculated)
44611.1 Da
IEP (calculated)
7.372
GRAVY (calculated)
-0.060
Length
411 amino acids
Sequence
(BLAST)
001: MATSIGINYG QIADNLPPPE KVVPLVKSMG ATRVKLYDAD PHVLKAFANS GVEFIVSLGN EYLSDMKDPA KAQAWVKTNV QAYLPATKIT CIAVGNEVLT
101: FNNTALSDNL LPAMENVYAA LVSMNLDKQV SVTTAHSVAI LETSYPPSSG AFRRDLVSCI TQVVDFHCKT GSPFLINAYP YFAYKADPKQ VQLDFVLFQP
201: NQGIVDPVTN LHYDNMLFAQ IDAVHSALAS IGYKNVCVQI SETGWPSKGD ADELGATPDN ARKYNCNLIK LVSQKKGTPL KPNSNLNIYV FALFNENLKP
301: GPMSERNYGL FKPDGTPSYP LGFAGVSTNS SSGRSPATGS GSTTPTSWSP QDGSSSPGYM SITSNSWVQF YCYFLNCKLH YWTCWEVPPL LSTVVKANLG
401: VSAIASCRFI L
Best Arabidopsis Sequence Match ( AT1G32860.1 )
(BLAST)
001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.