Factsheet for PGSC0003DMT400022520

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g057630.2.1	Tomato	nucleus	95.69	95.69
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	68.53	68.09
KRH46623	Soybean	nucleus	65.95	65.52
CDY28063	Canola	vacuole	64.87	65.43
Bra029639.1-P	Field mustard	vacuole	64.66	65.22
CDY24629	Canola	vacuole	64.44	65.0
KRG99621	Soybean	nucleus	65.3	64.88
AT3G07320.1	Thale cress	extracellular, vacuole	64.22	64.78
CDY45466	Canola	vacuole	64.01	64.57
CDY08004	Canola	vacuole	61.64	62.17
GSMUA_Achr8P08800_001	Banana	peroxisome, plastid, vacuole	46.34	55.27
GSMUA_Achr11P...	Banana	extracellular	49.35	52.16
CDX74052	Canola	vacuole	60.34	49.38
GSMUA_AchrUn_...	Banana	extracellular, vacuole	48.28	49.34
Bra001245.1-P	Field mustard	vacuole	60.13	49.29
EER99139	Sorghum	endoplasmic reticulum, plasma membrane	51.29	49.28
Zm00001d021024_P001	Maize	extracellular	50.65	49.06
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	48.28	47.66
HORVU5Hr1G075510.2	Barley	plasma membrane, vacuole	50.0	47.54
Os09t0502200-01	Rice	extracellular	48.71	47.08
Zm00001d031571_P001	Maize	extracellular	48.06	46.27
Os08t0525800-00	Rice	extracellular, mitochondrion, vacuole	46.34	46.14
EES14212	Sorghum	extracellular	48.06	46.07
Os03t0845600-01	Rice	extracellular, vacuole	45.91	44.94
TraesCS7A01G256800.1	Wheat	vacuole	47.63	44.74
TraesCS5A01G390600.1	Wheat	extracellular	47.63	44.74
TraesCS7B01G153600.1	Wheat	vacuole	47.41	44.62
TraesCS5D01G400400.1	Wheat	extracellular	46.77	43.93
EER90524	Sorghum	extracellular	45.47	43.69
Zm00001d004763_P001	Maize	extracellular	43.97	43.22
TraesCS5B01G279000.2	Wheat	extracellular	49.35	41.11
HORVU5Hr1G095380.1	Barley	cytosol	27.8	41.08
PGSC0003DMT400033482	Potato	extracellular, vacuole	40.3	39.45
PGSC0003DMT400001833	Potato	extracellular, vacuole	39.44	39.1
PGSC0003DMT400033484	Potato	extracellular, vacuole	32.76	38.1
PGSC0003DMT400078179	Potato	extracellular	34.91	36.16
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	35.34	35.96
PGSC0003DMT400047660	Potato	extracellular	29.53	35.86
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	28.66	35.85
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	29.31	35.51
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	27.16	35.39
PGSC0003DMT400008245	Potato	vacuole	34.48	34.63
PGSC0003DMT400000943	Potato	extracellular, vacuole	35.13	32.86
PGSC0003DMT400031570	Potato	extracellular, vacuole	28.88	32.21
PGSC0003DMT400079432	Potato	extracellular, vacuole	26.51	31.54
PGSC0003DMT400060499	Potato	extracellular	34.05	31.35
PGSC0003DMT400012898	Potato	cytosol	27.59	31.14
PGSC0003DMT400001908	Potato	extracellular	31.25	30.85
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	33.84	29.96
PGSC0003DMT400075818	Potato	extracellular	32.54	29.9
PGSC0003DMT400013154	Potato	extracellular, vacuole	26.94	28.34
PGSC0003DMT400081837	Potato	extracellular	29.09	27.11
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	32.76	26.9

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:102581967	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0009505	GO:GO:0009506	GO:GO:0016787	GO:GO:0016798	GO:GO:0030312
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M1AGV0	PFAM:PF00332	PFAM:PF07983	EnsemblPlantsGene:PGSC0003DMG400008727
PGSC:PGSC0003DMG400008727	EnsemblPlants:PGSC0003DMT400022520	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF230	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000294EB4A	InterPro:X8	RefSeq:XP_006366999.1	SEG:seg

Description

Beta-1,3-glucanase [Source:PGSC_GENE;Acc:PGSC0003DMG400008727]

Coordinates

chr9:-:31830073..31832104

Molecular Weight (calculated)

51030.5 Da

IEP (calculated)

9.619

GRAVY (calculated)

-0.127

Length

464 amino acids

Sequence
(BLAST)

001: MGCLSTLLVL FSLAFASFSS AEISSQVGIC YGQLGNNLPI PKNSVDLIKG LKAKRVKIYD TNPQILEALK GTNLQVSVMV PNELINNIST NQTLADQWVK
101: NNVVPFYPHT MIRYLLVGNE ILSSPPNTTW FNLVPAIRKI RFSVKKFGLG KIKIGTPLAI DMLESSFPPS NGTFRSDISE KVMKPLLHFL NRTKSFFFID
201: VYPYFAWAAQ PTVINLDYAL LDSKNITVSD PGSGLVYTNL LDQMIDAVYF AMKRVGYPDV RLFIAETGWP NAGGMDQIGA NIYNAATYNR NVIKKFTAKP
301: PIGTPAKPGV VVPTLLFALY NENQKPGPGT ERHFGLLYPN GTNVYGIDLS GKTPESEYKA LPRARNNEPY KGKIWCVVGR NANASELGGA MSYACGQGNR
401: TCDEIRPGGK CYNPNSLVSH ANYAFSSYWS QFKSSGGTCY FNGLTIPTKK DPSYGSCKFP SVTL

Best Arabidopsis Sequence Match ( AT3G07320.1 )
(BLAST)

001: MSLLLHLFAL SLLISVSGAK FSGRPGINYG QLGNNLPSPS DSVNLIKSLN AKRVKLYDAN PKILAALNGT DITVSVMVPN ELLVNISKSA SLSDDWIRSN
101: ILPFYPTTKI RYLLVGNEIL SLPDSELKSS LVPAMRKIQR SLKSLGVKKV KVGTTLATDV LQSSFPPSSG EFREDISGLI MKPMLQFLNR TKSFLFVDVY
201: PYFAWAQDPT HVDLDYAIFE STNVTVTDPV SNLTYHNLFD QMIDAFVFAM KRVGYPDIRI WVAETGWPNN GDYDQIGANI YNAATYNRNV VKKLAADPPV
301: GTPARPGKVL PAFVFALYNE NQKTGPGTER HFGLLHPNGT QVYGIDLSGK TEYKESLPAP ENNDLYKGKI WCVVAKGANW TQLGDALSYA CSQGNNTCDP
401: IQRGGPCQKP DLTVLHASYA FSSYWAQFRK IGGTCSFNGL ATQTIKDPSY GRCEFPSVTL

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:Q9SRT4]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.