Factsheet for PGSC0003DMT400040463

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, vacuole

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 3
plasma membrane 2
golgi 1
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, vacuole
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g005000.2.1	Tomato	extracellular	63.54	81.96
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	60.71	69.43
KRH17336	Soybean	plasma membrane	60.0	68.07
KRH30935	Soybean	extracellular, plasma membrane, vacuole	59.29	67.27
KRH72984	Soybean	vacuole	59.82	66.93
KRG97940	Soybean	extracellular, plasma membrane, vacuole	58.94	66.87
CDY16440	Canola	extracellular	56.28	63.1
Bra039757.1-P	Field mustard	extracellular, vacuole	56.11	62.77
PGSC0003DMT400075818	Potato	extracellular	56.11	62.77
CDY58676	Canola	extracellular, vacuole	55.93	62.7
AT1G66250.1	Thale cress	vacuole	55.75	62.38
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	53.98	60.52
Zm00001d048055_P001	Maize	plasma membrane	52.74	59.48
EER95256	Sorghum	extracellular, plasma membrane, vacuole	52.74	59.36
Zm00001d028243_P001	Maize	plasma membrane	52.57	59.16
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	54.34	59.15
TraesCS4D01G241900.1	Wheat	extracellular	51.5	58.2
TraesCS4B01G242300.1	Wheat	extracellular	51.5	58.2
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	49.73	55.75
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	51.33	54.92
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	42.12	45.42
PGSC0003DMT400081837	Potato	extracellular	39.82	45.18
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	54.16	44.48
PGSC0003DMT400033482	Potato	extracellular, vacuole	29.91	35.65
PGSC0003DMT400047660	Potato	extracellular	23.72	35.08
PGSC0003DMT400000943	Potato	extracellular, vacuole	30.62	34.88
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	21.77	34.55
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	27.79	34.43
PGSC0003DMT400078179	Potato	extracellular	26.9	33.93
PGSC0003DMT400001833	Potato	extracellular, vacuole	27.96	33.76
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	22.12	33.69
PGSC0003DMT400079432	Potato	extracellular, vacuole	22.65	32.82
PGSC0003DMT400022520	Potato	extracellular, vacuole	26.9	32.76
PGSC0003DMT400001908	Potato	extracellular	26.9	32.34
PGSC0003DMT400008245	Potato	vacuole	26.37	32.25
PGSC0003DMT400033484	Potato	extracellular, vacuole	22.48	31.83
PGSC0003DMT400012898	Potato	cytosol	22.48	30.9
PGSC0003DMT400060499	Potato	extracellular	27.26	30.56
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	20.53	30.29
PGSC0003DMT400031570	Potato	extracellular, vacuole	21.59	29.33
PGSC0003DMT400013154	Potato	extracellular, vacuole	21.24	27.21

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:102581946	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0016798	GO:GO:0046658	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	UniProt:M1B9Y9	PFAM:PF00332	PFAM:PF07983	EnsemblPlantsGene:PGSC0003DMG401015669	PGSC:PGSC0003DMG401015669
EnsemblPlants:PGSC0003DMT400040463	ScanProsite:PS00587	PANTHER:PTHR32227	PANTHER:PTHR32227:SF52	SMART:SM00768	SUPFAM:SSF51445
UniParc:UPI0002960E86	InterPro:X8	SEG:seg	:	:	:

Description

Glucan endo-1,3-beta-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG401015669]

Coordinates

chr11:-:1793557..1796656

Molecular Weight (calculated)

60284.3 Da

IEP (calculated)

7.322

GRAVY (calculated)

-0.068

Length

565 amino acids

Sequence
(BLAST)

001: MPHPTQVVAL LKAQQIRHVR LFNADRGMLL ALANTGIKVA VSVPNEQILG VGQSNTTAAN WVTQNVISHY PATNITTICV GSEVLSALPN AAPILVNALK
101: FIHSALLASN LDRQIKVSTP LASTIILDSF PPSQAFFNHT VKPVLIPLLK FLQSTNSYFM LNVYPYYDYM QSNSVIPLDY ALFKPLAANK EAVDSNTLLH
201: YTNVFDAMID AAYFAMADVN FTNIPVMVTE SGWPSMGESN EPDATVDNAN TYNSNLIKHV LNKTGTPKHP GIAVSTYIYE LYNEDAKAGP LSEKNWGLFS
301: NNGTPVYILR LTESGSLFAN NTSNQTYCVA KEGADTKMLQ AGLDWACGTG KVNCAPLMQG GPCYDPDNVA AHATYAFDAY YHMMGKAPGT CDFTGVATIT
401: TTNPSHGTCL FSSYFYQNAT EITHRLLTRI KVTKYADEIT RGTCRVVASP SFVNVNVYRG SQNNLQAATA AQVGGGAAKS GGAKDVTIVI RDGINGKVNT
501: TTSVYSSSST SYVENNKCGI CKKAVTLESV SVNDGIRAND GGGGNVGVDA TGGASHAKTS SGTSS

Best Arabidopsis Sequence Match ( AT1G66250.1 )
(BLAST)

001: MASLLHLLLL SLSLLVLASA SPSPPADEGS YIGVNIGTDL SDMPHPTQVV ALLKAQEIRH IRLYNADPGL LIALANTGIK VIISIPNDQL LGIGQSNSTA
101: ANWVKRNVIA HYPATMITAV SVGSEVLTSL SNAAPVLVSA IKNVHAALLS ANLDKLIKVS TPLSTSLILD PFPPSQAFFN RSLNAVIVPL LSFLQSTNSY
201: LMVNVYPYID YMQSNGVIPL DYALFKPIPP NKEAVDANTL VRYSNAFDAM VDATYFAMAF LNFTNIPVLV TESGWPSKGE TNEPDATLDN ANTYNSNLIR
301: HVLNKTGTPK RPGIAVSTYI YELYNEDTKA GLSEKNWGLF NANGEPVYVL RLTNSGSVLA NDTTNQTYCT AREGADTKML QAALDWACGP GKIDCSPIKQ
401: GETCYEPDNV VAHANYAFDT YYHQTGNNPD ACNFNGVASI TTTDPSHGTC VFAGSRGNGR NGTSVNITAP SANSTTSSGI RSDLYYSRGI WSILTVMILN
501: VANIL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C7U5]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.