Factsheet for PGSC0003DMT400079432

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 2
mitochondrion 1
vacuole 4
extracellular 5
endoplasmic reticulum 3
plasma membrane 3
golgi 3
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g008150.2.1	Tomato	extracellular, vacuole	98.46	98.46
CDX83243	Canola	vacuole	67.44	69.58
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	67.18	69.31
CDY38531	Canola	golgi, vacuole	66.92	68.32
KRH20124	Soybean	golgi, vacuole	67.69	68.04
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	66.41	66.75
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	66.92	66.24
GSMUA_AchrUn_...	Banana	cytosol	47.18	61.95
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	66.15	61.72
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	49.49	57.61
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	54.36	57.14
EER88625	Sorghum	extracellular, plasma membrane, vacuole	57.18	56.89
Zm00001d046534_P001	Maize	plasma membrane	56.41	55.84
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	50.77	55.62
TraesCS7A01G378100.1	Wheat	golgi, vacuole	56.67	55.39
TraesCS7B01G279900.1	Wheat	golgi, vacuole	56.41	55.14
HORVU0Hr1G021950.4	Barley	golgi, vacuole	55.9	54.5
TraesCS7D01G374900.1	Wheat	plastid, vacuole	56.41	49.77
Os06t0607000-01	Rice	plasma membrane	58.72	47.51
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	37.44	38.12
PGSC0003DMT400031570	Potato	extracellular, vacuole	40.26	37.74
PGSC0003DMT400012898	Potato	cytosol	39.49	37.47
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	46.92	35.67
PGSC0003DMT400033484	Potato	extracellular, vacuole	34.62	33.83
PGSC0003DMT400047660	Potato	extracellular	33.08	33.77
PGSC0003DMT400001833	Potato	extracellular, vacuole	37.95	31.62
PGSC0003DMT400013154	Potato	extracellular, vacuole	35.38	31.29
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	36.15	30.92
PGSC0003DMT400001908	Potato	extracellular	35.64	29.57
PGSC0003DMT400033482	Potato	extracellular, vacuole	35.9	29.54
PGSC0003DMT400078179	Potato	extracellular	33.85	29.46
PGSC0003DMT400000943	Potato	extracellular, vacuole	35.64	28.02
PGSC0003DMT400075818	Potato	extracellular	34.36	26.53
PGSC0003DMT400022520	Potato	extracellular, vacuole	31.54	26.51
PGSC0003DMT400008245	Potato	vacuole	30.51	25.76
PGSC0003DMT400081837	Potato	extracellular	31.79	24.9
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	31.28	23.28
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	32.82	22.65
PGSC0003DMT400060499	Potato	extracellular	29.23	22.62

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:102579470	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	UniProt:M1D1U7	PFAM:PF00332	EnsemblPlantsGene:PGSC0003DMG402030921	PGSC:PGSC0003DMG402030921	EnsemblPlants:PGSC0003DMT400079432
PANTHER:PTHR32227	PANTHER:PTHR32227:SF47	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000296F9E7	RefSeq:XP_006358284.1

Description

Glycosyl hydrolase family 17 protein [Source:PGSC_GENE;Acc:PGSC0003DMG402030921]

Coordinates

chr7:-:4419411..4425199

Molecular Weight (calculated)

42833.5 Da

IEP (calculated)

9.002

GRAVY (calculated)

-0.057

Length

390 amino acids

Sequence
(BLAST)

001: MKILLRFLFM LLVIFNPNAQ QTARAFTGTY GINYGRIADN IPSPDKVVKL LRAAKIKNVR IYDAEPSVLN AFKGTGLELV VGLPNGFVKE MSANADHALN
101: WVKDNVKAFL PDTRIVGIAV GNEVLGGSDN EMEVALLNAV KNVYNATKKL GISDVVQIST AHSQAVFADS FPPSYCVFKD GVAQLMKPLL EFFSKIGSPF
201: CLNAYPFLAY TYNPDKIDIN YALFQPNEGI VDNKTHLHYD NLLDAQIDAA YAALEDAGFR KMEVIVTETG WASDGDENEP AATPSNARTY NYNLRKRLAK
301: RKGTPLRPKK MLKAYIFALF NEYQKPGQSS EKNFGLFKAD GSISYDVGFS GLQDISAASS LLSLKGIQAQ GYYLSATAIT TSISILLSRL

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.