Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc12g040860.1.1 | Tomato | extracellular, plasma membrane, vacuole | 94.3 | 94.3 |
| VIT_18s0122g00980.t01 | Wine grape | extracellular | 75.66 | 75.0 |
| PGSC0003DMT400067771 | Potato | extracellular, plasma membrane, vacuole | 34.21 | 40.73 |
| PGSC0003DMT400078179 | Potato | extracellular | 39.04 | 39.73 |
| PGSC0003DMT400048136 | Potato | cytosol, plastid, vacuole | 30.26 | 38.76 |
| PGSC0003DMT400001908 | Potato | extracellular | 39.47 | 38.3 |
| PGSC0003DMT400031570 | Potato | extracellular, vacuole | 34.87 | 38.22 |
| PGSC0003DMT400047660 | Potato | extracellular | 31.8 | 37.96 |
| PGSC0003DMT400001833 | Potato | extracellular, vacuole | 38.6 | 37.61 |
| PGSC0003DMT400033482 | Potato | extracellular, vacuole | 38.82 | 37.34 |
| PGSC0003DMT400000943 | Potato | extracellular, vacuole | 40.35 | 37.1 |
| PGSC0003DMT400008245 | Potato | vacuole | 37.5 | 37.01 |
| PGSC0003DMT400012898 | Potato | cytosol | 32.68 | 36.25 |
| PGSC0003DMT400079432 | Potato | extracellular, vacuole | 30.92 | 36.15 |
| PGSC0003DMT400022520 | Potato | extracellular, vacuole | 35.96 | 35.34 |
| PGSC0003DMT400015234 | Potato | cytosol, peroxisome, plastid | 28.73 | 35.31 |
| PGSC0003DMT400060499 | Potato | extracellular | 38.82 | 35.12 |
| PGSC0003DMT400075818 | Potato | extracellular | 37.94 | 34.26 |
| PGSC0003DMT400033484 | Potato | extracellular, vacuole | 29.61 | 33.83 |
| PGSC0003DMT400013154 | Potato | extracellular, vacuole | 32.02 | 33.11 |
| PGSC0003DMT400081837 | Potato | extracellular | 35.53 | 32.53 |
| PGSC0003DMT400042484 | Potato | extracellular, plasma membrane, vacuole | 33.55 | 29.2 |
| PGSC0003DMT400040463 | Potato | mitochondrion, vacuole | 34.43 | 27.79 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | ProteinID:AFU52645 | ProteinID:AFU52645.1 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016787 |
| GO:GO:0016798 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | EMBL:JX838864 | UniProt:M1B5F7 | PFAM:PF00332 |
| PFAM:PF07983 | EnsemblPlantsGene:PGSC0003DMG400014457 | PGSC:PGSC0003DMG400014457 | EnsemblPlants:PGSC0003DMT400037469 | ScanProsite:PS00587 | PANTHER:PTHR32227 |
| PANTHER:PTHR32227:SF89 | SMART:SM00768 | SUPFAM:SSF51445 | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI000295A6E2 |
| InterPro:X8 | SEG:seg | : | : | : | : |
Description
Glucan endo-1,3-beta-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400014457]
Coordinates
chr12:-:48603571..48606131
Molecular Weight (calculated)
50259.7 Da
IEP (calculated)
6.309
GRAVY (calculated)
-0.111
Length
456 amino acids
Sequence
(BLAST)
(BLAST)
001: MSLFCSLVLP LFILLPLISY NVYGVGINYG TIGSNLPSPK KVAQLLQSTI FDKVKIYDTN PEILEAFSNT GIDLIVAVEN SHIRNLSATQ SNADKWFVTR
101: ILPFIPSTSI VTIAVGNEYL TDDQLLDHNA LLQAMQNLHS VLLSRGLDRK IKVSTPHSMA VLASSFPPSS STFATTLLPV MTSIVALLAD TNSPFMINAY
201: PYFAYRDNPS MVNLEYALLG NASGVRDPKG YVYNNMLDAQ IDAIRSAINA LGFGNRTIQI VVSESGWPSK GDASATNENA RTYNTRLIER AQSNKGTPMN
301: PKDRIDVFVF ALFNENKKQG GISERNFGIF NGDGTKVYDV DLSCEFCSNE KFGGKIESSL LRSRGPSVWC VAKPHADEKV IQAVLDFCCG PGGVDCREID
401: ENGDCFQPDK VYAHASYAMN AYYQMHGRNY WNCDFKGTGL VTFSDPSYGK CFYSHQ
101: ILPFIPSTSI VTIAVGNEYL TDDQLLDHNA LLQAMQNLHS VLLSRGLDRK IKVSTPHSMA VLASSFPPSS STFATTLLPV MTSIVALLAD TNSPFMINAY
201: PYFAYRDNPS MVNLEYALLG NASGVRDPKG YVYNNMLDAQ IDAIRSAINA LGFGNRTIQI VVSESGWPSK GDASATNENA RTYNTRLIER AQSNKGTPMN
301: PKDRIDVFVF ALFNENKKQG GISERNFGIF NGDGTKVYDV DLSCEFCSNE KFGGKIESSL LRSRGPSVWC VAKPHADEKV IQAVLDFCCG PGGVDCREID
401: ENGDCFQPDK VYAHASYAMN AYYQMHGRNY WNCDFKGTGL VTFSDPSYGK CFYSHQ
001: MAVSFLPYFL ILSFLSAIDA HSGMVGVNYG RIANNLPSPE KVVNLLKSQG INRIKIFDTD KNVLTALANS KIKVIVALPN ELLSSAASHQ SFADNWIKTH
101: IMPYFPATEI EAIAVGNEVF VDPTITPYLV NAMKNIHTSL VKYKLDKAIK ISSPIALSAL ANSYPPSSGS FKPELIEPVV KPMLALLQQT SSYLMVNAYP
201: FFAYAANADK ISLDYALFKE NAGNIDSGTG LKYNSLFDAQ IDAVYAALSA VGFKGVKVMV TETGWPSVGD ENEIGASESN AAAYNAGLVK RVLTGKGTPL
301: RPTEPLNVYL FALFNENQKP GPTSERNYGL FYPNEGKVYN VPFTKKSTTP VNGNRGKVPV THEGHTWCVS NGEVAKEKLQ EALDYACGEG GADCRPIQPG
401: ATCYHPESLE AHASYAFNSY YQKNSRRVGT CFFGGAAHVV TQPPRYGKCE FPTGH
101: IMPYFPATEI EAIAVGNEVF VDPTITPYLV NAMKNIHTSL VKYKLDKAIK ISSPIALSAL ANSYPPSSGS FKPELIEPVV KPMLALLQQT SSYLMVNAYP
201: FFAYAANADK ISLDYALFKE NAGNIDSGTG LKYNSLFDAQ IDAVYAALSA VGFKGVKVMV TETGWPSVGD ENEIGASESN AAAYNAGLVK RVLTGKGTPL
301: RPTEPLNVYL FALFNENQKP GPTSERNYGL FYPNEGKVYN VPFTKKSTTP VNGNRGKVPV THEGHTWCVS NGEVAKEKLQ EALDYACGEG GADCRPIQPG
401: ATCYHPESLE AHASYAFNSY YQKNSRRVGT CFFGGAAHVV TQPPRYGKCE FPTGH
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:TAIR;Acc:AT4G26830]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.