Factsheet for PGSC0003DMT400075818

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc04g007910.2.1	Tomato	extracellular	96.24	96.24
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	76.63	77.71
KRH41666	Soybean	plasma membrane	73.27	74.15
KRH70129	Soybean	cytosol	70.69	72.86
KRH08471	Soybean	extracellular	70.5	71.77
Os03t0221500-01	Rice	extracellular, plasma membrane, vacuole	68.51	68.65
Zm00001d048055_P001	Maize	plasma membrane	67.52	68.06
EER95256	Sorghum	extracellular, plasma membrane, vacuole	67.52	67.93
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	69.7	67.82
Zm00001d028243_P001	Maize	plasma membrane	67.33	67.73
TraesCS4D01G241900.1	Wheat	extracellular	66.14	66.8
TraesCS4B01G242300.1	Wheat	extracellular	65.94	66.6
KRH60366	Soybean	extracellular	73.86	64.64
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	66.73	63.83
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	63.56	63.69
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	62.77	56.11
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	69.9	51.31
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	51.88	50.0
PGSC0003DMT400081837	Potato	extracellular	47.33	47.99
PGSC0003DMT400047660	Potato	extracellular	30.1	39.79
PGSC0003DMT400001833	Potato	extracellular, vacuole	36.24	39.1
PGSC0003DMT400078179	Potato	extracellular	33.86	38.17
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	34.26	37.94
PGSC0003DMT400033482	Potato	extracellular, vacuole	35.25	37.55
PGSC0003DMT400000943	Potato	extracellular, vacuole	36.83	37.5
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	24.95	35.39
PGSC0003DMT400001908	Potato	extracellular	32.67	35.11
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	25.54	34.77
PGSC0003DMT400079432	Potato	extracellular, vacuole	26.53	34.36
PGSC0003DMT400033484	Potato	extracellular, vacuole	26.73	33.83
PGSC0003DMT400008245	Potato	vacuole	30.3	33.12
PGSC0003DMT400022520	Potato	extracellular, vacuole	29.9	32.54
PGSC0003DMT400012898	Potato	cytosol	26.34	32.36
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	24.36	32.11
PGSC0003DMT400031570	Potato	extracellular, vacuole	25.94	31.49
PGSC0003DMT400060499	Potato	extracellular	31.29	31.35
PGSC0003DMT400013154	Potato	extracellular, vacuole	26.14	29.93

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:102581557	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:AFU52641	ProteinID:AFU52641.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152
GO:GO:0016787	GO:GO:0016798	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EMBL:JX838860	UniProt:M1CVS3
PFAM:PF00332	PFAM:PF07983	EnsemblPlantsGene:PGSC0003DMG400029476	PGSC:PGSC0003DMG400029476	EnsemblPlants:PGSC0003DMT400075818	ScanProsite:PS00587
PANTHER:PTHR32227	PANTHER:PTHR32227:SF147	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000294A475	InterPro:X8	RefSeq:XP_006355069.1	SEG:seg	:	:

Description

Glucan endo-1,3-beta-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG400029476]

Coordinates

chr4:-:2542310..2549263

Molecular Weight (calculated)

54596.7 Da

IEP (calculated)

5.456

GRAVY (calculated)

0.072

Length

505 amino acids

Sequence
(BLAST)

001: MKSSMDLLVL LLLIPHLLAF AFSANEEAFV GVNIGTDVSD MPSPVQVVAL LKAQQIRHVR LFDADQAMLL ALAHTEIRVT VSVPNDQLLG IGQSNSTAAN
101: WVSRNILSHV PATNITAIAI GSEVLTTLPN AAPLLVSAMK FIHSALVAAN LDTKIKVSTP HSSFIILDSF PPSQAFFNRS LDPVMVPLLK FLQDTGSYFM
201: LNVYPYYDYM KSNGVIALDY ALFRPLPPNK EAVDSNTLLH YTNVFDAVVD AAYFSMSYLN FTNIPVVVTE SGWPSKGDST EPDASLDNAN TYNSNLIRHV
301: LNNTGTPKHP GIAVSTYIYE LYNEDLRPGS ISEKNWGLFD SNGVPVYIMH LTGSGTVLAN DTTNQTYCVA KENADKKMVQ AALDWACGPG KVDCTPLLQE
401: NPCYDPNTVF AHASYAFDAY YHKMGMADGT CNFNGVAKVT TTDPSHSSCI YPGSGGRNGT FTNSSTVAPS SDSASGCHSQ YSHDVHTFLS SLIVGLLTLS
501: TAAFL

Best Arabidopsis Sequence Match ( AT2G01630.1 )
(BLAST)

001: MAALLLLFLF LFASSALSQD SLIGVNIGTE VTNMPSPTQV VALLKSQNIN RVRLYDADRS MLLAFAHTGV QVIISVPNDQ LLGISQSNAT AANWVTRNVA
101: AYYPATNITT IAVGSEVLTS LTNAASVLVS ALKYIQAALV TANLDRQIKV STPHSSTIIL DSFPPSQAFF NKTWDPVIVP LLKFLQSTGS PLLLNVYPYF
201: DYVQSNGVIP LDYALFQPLQ ANKEAVDANT LLHYTNVFDA IVDAAYFAMS YLNFTNIPIV VTESGWPSKG GPSEHDATVE NANTYNSNLI QHVINKTGTP
301: KHPGTAVTTY IYELYNEDTR PGPVSEKNWG LFYTNGTPVY TLRLAGAGAI LANDTTNQTF CIAKEKVDRK MLQAALDWAC GPGKVDCSAL MQGESCYEPD
401: DVVAHSTYAF NAYYQKMGKA SGSCDFKGVA TVTTTDPSRG TCVFPGSAKS NQTLGNNTSA LAPSANSTTS GCIPKYYHHP HASFGDLTLL SLLLIIALVF
501: L

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZU91]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.