Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58918 | Soybean | endoplasmic reticulum | 69.28 | 69.56 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 69.08 | 69.35 |
| VIT_06s0004g00720.t01 | Wine grape | extracellular, vacuole | 64.46 | 67.86 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 67.07 | 67.07 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 65.86 | 65.47 |
| Bra027421.1-P | Field mustard | extracellular, plasma membrane, vacuole | 62.05 | 61.68 |
| AT3G13560.4 | Thale cress | plasma membrane | 62.25 | 61.39 |
| CDY59252 | Canola | extracellular, plasma membrane, vacuole | 50.0 | 61.03 |
| CDY23618 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 49.4 | 58.43 |
| GSMUA_Achr2P17770_001 | Banana | plasma membrane, vacuole | 41.97 | 52.51 |
| GSMUA_Achr6P29690_001 | Banana | extracellular, plasma membrane, vacuole | 55.02 | 52.29 |
| GSMUA_Achr8P15370_001 | Banana | extracellular, plasma membrane, vacuole | 54.02 | 51.83 |
| Zm00001d006658_P005 | Maize | extracellular, plasma membrane, vacuole | 51.2 | 51.83 |
| HORVU2Hr1G036980.5 | Barley | plasma membrane | 50.8 | 51.42 |
| TraesCS2A01G186900.1 | Wheat | extracellular, plasma membrane, vacuole | 50.6 | 51.12 |
| TraesCS2B01G220300.1 | Wheat | plasma membrane | 50.6 | 51.12 |
| OQU90151 | Sorghum | vacuole | 50.6 | 51.01 |
| TraesCS5B01G153900.1 | Wheat | plasma membrane | 50.8 | 50.91 |
| TraesCS2D01G201000.1 | Wheat | extracellular, plasma membrane, vacuole | 50.2 | 50.71 |
| HORVU5Hr1G048630.2 | Barley | plasma membrane, vacuole | 50.4 | 50.6 |
| TraesCS5A01G155600.1 | Wheat | plasma membrane | 50.4 | 50.5 |
| Os07t0577300-01 | Rice | extracellular | 50.4 | 50.4 |
| Zm00001d021903_P001 | Maize | extracellular, plasma membrane, vacuole | 50.2 | 50.0 |
| TraesCS5D01G160700.1 | Wheat | plasma membrane | 50.4 | 47.99 |
| PGSC0003DMT400075818 | Potato | extracellular | 47.99 | 47.33 |
| PGSC0003DMT400042484 | Potato | extracellular, plasma membrane, vacuole | 43.57 | 41.41 |
| PGSC0003DMT400040463 | Potato | mitochondrion, vacuole | 45.18 | 39.82 |
| PGSC0003DMT400048136 | Potato | cytosol, plastid, vacuole | 25.5 | 35.67 |
| PGSC0003DMT400037469 | Potato | plasma membrane, vacuole | 32.53 | 35.53 |
| PGSC0003DMT400001833 | Potato | extracellular, vacuole | 33.13 | 35.26 |
| PGSC0003DMT400015234 | Potato | cytosol, peroxisome, plastid | 25.5 | 34.23 |
| PGSC0003DMT400001908 | Potato | extracellular | 31.93 | 33.83 |
| PGSC0003DMT400033482 | Potato | extracellular, vacuole | 32.13 | 33.76 |
| PGSC0003DMT400000943 | Potato | extracellular, vacuole | 33.13 | 33.27 |
| PGSC0003DMT400067771 | Potato | extracellular, plasma membrane, vacuole | 25.3 | 32.9 |
| PGSC0003DMT400078179 | Potato | extracellular | 29.32 | 32.59 |
| PGSC0003DMT400008245 | Potato | vacuole | 29.92 | 32.25 |
| PGSC0003DMT400012898 | Potato | cytosol | 26.51 | 32.12 |
| PGSC0003DMT400079432 | Potato | extracellular, vacuole | 24.9 | 31.79 |
| PGSC0003DMT400031570 | Potato | extracellular, vacuole | 26.1 | 31.25 |
| PGSC0003DMT400047660 | Potato | extracellular | 23.9 | 31.15 |
| PGSC0003DMT400033484 | Potato | extracellular, vacuole | 24.7 | 30.83 |
| PGSC0003DMT400060499 | Potato | extracellular | 30.12 | 29.76 |
| PGSC0003DMT400022520 | Potato | extracellular, vacuole | 27.11 | 29.09 |
| PGSC0003DMT400013154 | Potato | extracellular, vacuole | 24.9 | 28.12 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 |
| GO:GO:0005575 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | UniProt:M1D545 | PFAM:PF00332 | PFAM:PF07983 |
| EnsemblPlantsGene:PGSC0003DMG400032133 | PGSC:PGSC0003DMG400032133 | EnsemblPlants:PGSC0003DMT400081837 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF232 | SMART:SM00768 |
| SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI0002960209 | InterPro:X8 | SEG:seg | : |
Description
Glucan endo-1,3-beta-glucosidase 4 [Source:PGSC_GENE;Acc:PGSC0003DMG400032133]
Coordinates
chr1:+:1413744..1419552
Molecular Weight (calculated)
53944.7 Da
IEP (calculated)
4.812
GRAVY (calculated)
0.044
Length
498 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLKPWLAIS ILFFFFISNV IGAFVGINIG TDVTNLPPAS DVVALLKARQ ITHVRLFNAD AHMLNALANT SIEVIIGVTN EEVLGIGESP STAAAWVNRN
101: VAAYMPGTNI TAIAVGSEVL TAIPNAAPVL VPAMNYLHKA LVASRLNNQV KVSTPQSMDV IAKAFPPSTA TFNSSWNSTI FQILQFLRNT NSYYMLNAYP
201: YYEYVHSDGI FPIEYALFQP LSAVKQIVDP NTLFHYVSMF DALVDATYNS IEALNFSDIP VVVTETGWPW AGGSNEPDAT KENAETFNNN LIRRVSNDTG
301: PPSQPKIPIN TFIYEMFNED KRPGPISERS WGVFSTNGSD VYTLGLGSSD SISDNSSTAF CVAKPGADEN KLQDGINWAC GQGRANCSAI QSGKPCYFPD
401: TIQNHASYAY NDYYQRMHSL GGTCDFDGTA TMTTQDPSSR TCKFTGSSNS GGGVFPPAAF GPISATSQCS TIRSPVIAYT MVVFLALLIL DVNAHFVF
101: VAAYMPGTNI TAIAVGSEVL TAIPNAAPVL VPAMNYLHKA LVASRLNNQV KVSTPQSMDV IAKAFPPSTA TFNSSWNSTI FQILQFLRNT NSYYMLNAYP
201: YYEYVHSDGI FPIEYALFQP LSAVKQIVDP NTLFHYVSMF DALVDATYNS IEALNFSDIP VVVTETGWPW AGGSNEPDAT KENAETFNNN LIRRVSNDTG
301: PPSQPKIPIN TFIYEMFNED KRPGPISERS WGVFSTNGSD VYTLGLGSSD SISDNSSTAF CVAKPGADEN KLQDGINWAC GQGRANCSAI QSGKPCYFPD
401: TIQNHASYAY NDYYQRMHSL GGTCDFDGTA TMTTQDPSSR TCKFTGSSNS GGGVFPPAAF GPISATSQCS TIRSPVIAYT MVVFLALLIL DVNAHFVF
001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.