Factsheet for GSMUA_Achr2P17770_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P29690_001	Banana	extracellular, plasma membrane, vacuole	75.38	57.25
GSMUA_Achr8P15370_001	Banana	extracellular, plasma membrane, vacuole	74.37	57.03
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	65.58	52.94
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	65.33	52.74
HORVU2Hr1G036980.5	Barley	plasma membrane	64.57	52.24
OQU90151	Sorghum	vacuole	64.82	52.23
TraesCS2B01G220300.1	Wheat	plasma membrane	64.57	52.13
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	64.07	51.83
TraesCS5B01G153900.1	Wheat	plasma membrane	64.57	51.71
TraesCS5A01G155600.1	Wheat	plasma membrane	64.57	51.71
HORVU5Hr1G048630.2	Barley	plasma membrane, vacuole	64.32	51.61
Os07t0577300-01	Rice	extracellular	63.82	51.0
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	63.07	50.2
TraesCS5D01G160700.1	Wheat	plasma membrane	65.08	49.52
CDY59252	Canola	extracellular, plasma membrane, vacuole	47.74	46.57
KRH58918	Soybean	endoplasmic reticulum	56.53	45.36
KRH42823	Soybean	extracellular, plasma membrane, vacuole	56.53	45.36
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	52.26	43.97
CDY23618	Canola	endoplasmic reticulum, plasma membrane, vacuole	45.98	43.47
KRH05027	Soybean	extracellular, plasma membrane, vacuole	53.27	42.57
KRH16072	Soybean	extracellular, plasma membrane, vacuole	53.27	42.32
PGSC0003DMT400081837	Potato	extracellular	52.51	41.97
AT3G13560.4	Thale cress	plasma membrane	49.5	39.01
Bra027421.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.24	38.32
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	45.73	35.07
GSMUA_Achr4P27760_001	Banana	cytosol, extracellular, vacuole	20.85	33.74
GSMUA_Achr2P13900_001	Banana	cytosol	40.45	32.39
GSMUA_Achr4P33420_001	Banana	vacuole	41.46	32.16
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	27.64	27.09
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	31.41	27.06
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	22.61	26.87
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	46.23	26.74
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	28.14	26.6
GSMUA_AchrUn_...	Banana	cytosol	19.85	26.6
GSMUA_Achr8P08800_001	Banana	peroxisome, plastid, vacuole	25.88	26.48
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	27.14	26.41
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	29.4	25.49
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	25.88	23.95
GSMUA_Achr11P...	Banana	extracellular	26.13	23.69
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	25.38	23.43
GSMUA_Achr11P...	Banana	vacuole	22.61	23.38
GSMUA_Achr7P08120_001	Banana	plastid	18.59	22.98
GSMUA_AchrUn_...	Banana	extracellular, vacuole	25.63	22.47
GSMUA_Achr3P14330_001	Banana	cytosol, plasma membrane, vacuole	26.88	21.19
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	20.85	20.96
GSMUA_Achr7P26810_001	Banana	plastid	15.33	20.61
GSMUA_Achr6P13230_001	Banana	vacuole	17.09	20.24
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	22.61	19.69
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	20.1	15.59
GSMUA_Achr10P...	Banana	mitochondrion	13.32	14.17

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr2G17770_001	EnsemblPlants:GSMUA_Achr2P17770_001
EnsemblPlants:GSMUA_Achr2T17770_001	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:M0S8W8	PFAM:PF00332	PFAM:PF07983
PANTHER:PTHR32227	PANTHER:PTHR32227:SF232	SMART:SM00768	SUPFAM:SSF51445	SignalP:SignalP-TM	TMHMM:TMhelix
UniParc:UPI000295626C	InterPro:X8	SEG:seg	:	:	:

Description

Putative Glucan endo-1,3-beta-glucosidase 4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G17770_001]

Coordinates

chr2:-:18185783..18190450

Molecular Weight (calculated)

42182.2 Da

IEP (calculated)

4.683

GRAVY (calculated)

0.180

Length

398 amino acids

Sequence
(BLAST)

001: MVPGKWERSI FLLVLLFANA SGSVYVGINI GNMVSNLPSA ADIVSILKTQ QIKHVRLFDA NHQMLGALAN TGIDVMLGVP NDQLLRIGNS RSEAADWINK
101: NVAAFVPETN ITYIAVGNEI LTSIPNAALV LVPAMQFLQS ALVASNLNSQ VKVSSPLSMD MIPKSFPPST ATFNSSWNSP LNPNNQIVDP NTNFYYTNMF
201: DAMVDAAYYS MQSLNFTGIP VIVTASGWPS QGGANESDAT VDNALIYNSN LVHPVSKPDP TGLVGVFCVA NPSADSNALK KGLDWACGPG EANCTAILPG
301: EPCYDASNLV ALASYAYNDY YHRMKASGGT CSFGNTAMIS STNPSHGSCI FAGSSGPSNS TDSSSAFGPS ISYGVSQKLQ LLCLALILQI VLCYLFDI

Best Arabidopsis Sequence Match ( AT3G13560.1 )
(BLAST)

001: MLLPRWFAEA LLLLLSILAC SNAAFIGVNI GTDLTNMPPP SDIVTLLKSQ QITHVRLYDA NSHMLKAFAN TSIEVMVGVT NEEILKIGRF PSAAAAWVNK
101: NVAAYIPSTN ITAIAVGSEV LTTIPHVAPI LASALNNIHK ALVASNLNFK VKVSSPMSMD IMPKPFPPST STFSPSWNTT VYQLLQFLKN TGSFFMLNAY
201: PYYGYTTANG IFPLDYALFK QLSPVKQIVD PNTLLHYNSM FDAMVDAAYY SMEALNFSKI PVVVTETGWP SSGGSDEAAA TVANAETFNT NLIKRVLNNS
301: GPPSQPDIPI NTYIYELYNE DKRSGPVSER NWGILFPNGT SVYPLSLSGG SSSAALNGSS MFCVAKADAD DDKLVDGLNW ACGQGRANCA AIQPGQPCYL
401: PNDVKSHASF AFNDYYQKMK SAGGTCDFDG TAITTTRDPS YRTCAYTGSL NANATNGNFP PDALGPASPL GGNANARIIF SYHLPILAPL ALTLLQLLLQ
501: HDRLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q94CD8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.