Factsheet for GSMUA_Achr3P30520_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, vacuole, cytosol

Predictor Summary:

nucleus 1
vacuole 1
plasma membrane 1
mitochondrion 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P26810_001	Banana	plastid	40.26	62.16
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	52.74	52.51
TraesCS4A01G293500.1	Wheat	plasma membrane	51.86	50.64
TraesCS4B01G020100.1	Wheat	extracellular	50.98	50.32
Os03t0669300-02	Rice	endoplasmic reticulum	50.77	50.0
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	49.67	49.46
GSMUA_Achr7P08120_001	Banana	plastid	34.57	49.07
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	49.23	49.02
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	50.33	48.83
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	49.02	48.17
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	48.58	47.95
Bra033641.1-P	Field mustard	extracellular, vacuole	44.86	47.45
CDY22386	Canola	extracellular, vacuole	44.64	47.22
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	48.8	46.95
CDX71547	Canola	extracellular, vacuole	44.64	46.79
Solyc04g080260.2.1	Tomato	extracellular	44.86	46.49
PGSC0003DMT400013154	Potato	extracellular, vacuole	44.86	46.49
KRH24481	Soybean	cytosol	36.54	46.39
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	49.45	46.12
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	44.2	46.12
PGSC0003DMT400001908	Potato	extracellular	46.39	45.11
Bra039852.1-P	Field mustard	vacuole	45.95	45.06
Solyc01g109570.2.1	Tomato	extracellular	46.61	45.03
KRH15221	Soybean	extracellular	47.26	44.63
CDX75437	Canola	extracellular, plasma membrane, vacuole	48.58	43.87
CDX69064	Canola	extracellular, plasma membrane, vacuole	48.14	43.56
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	48.14	43.48
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	47.48	43.06
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	50.11	42.72
AT2G16230.1	Thale cress	vacuole	46.61	42.35
CDY37244	Canola	vacuole	45.95	41.02
CDY26761	Canola	vacuole	45.51	40.62
Bra017659.1-P	Field mustard	vacuole	47.48	39.17
GSMUA_Achr11P...	Banana	plasma membrane, vacuole	30.63	34.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular, vacuole	34.79	34.42
GSMUA_Achr6P05040_001	Banana	extracellular, vacuole	32.17	34.19
GSMUA_Achr6P13230_001	Banana	vacuole	23.41	31.85
GSMUA_Achr11P...	Banana	vacuole	26.48	31.43
GSMUA_AchrUn_...	Banana	cytosol	20.35	31.31
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	27.57	30.81
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	27.79	30.17
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	21.88	29.85
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	25.82	29.8
GSMUA_Achr8P08800_001	Banana	peroxisome, plastid, vacuole	23.41	27.51
GSMUA_Achr10P...	Banana	mitochondrion	22.32	27.27
GSMUA_Achr4P33420_001	Banana	vacuole	30.2	26.9
GSMUA_Achr2P13900_001	Banana	cytosol	28.67	26.36
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	29.32	25.82
GSMUA_Achr3P14330_001	Banana	cytosol, plasma membrane, vacuole	28.45	25.74
GSMUA_Achr11P...	Banana	extracellular	23.85	24.83
GSMUA_Achr4P02650_001	Banana	extracellular, vacuole	22.98	24.36
GSMUA_AchrUn_...	Banana	extracellular, vacuole	23.19	23.35
GSMUA_Achr8P15370_001	Banana	extracellular, plasma membrane, vacuole	26.26	23.12
GSMUA_Achr6P29690_001	Banana	extracellular, plasma membrane, vacuole	26.48	23.09
GSMUA_Achr2P17770_001	Banana	plasma membrane, vacuole	19.69	22.61
GSMUA_Achr4P27760_001	Banana	cytosol, extracellular, vacuole	12.04	22.36
GSMUA_Achr2P21600_001	Banana	mitochondrion, nucleus, plasma membrane	28.67	19.04
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	18.82	16.76

Protein Annotations

EnsemblPlants:GSMUA_Achr3P30520_001	EnsemblPlants:GSMUA_Achr3T30520_001	EnsemblPlantsGene:GSMUA_Achr3G30520_001	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824
GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SF	KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF228	PFAM:PF00332	SEG:seg
SUPFAM:SSF51445	UniParc:UPI00029581EB	UniProt:M0SJ66	MapMan:50.3.2	:	:

Description

Whole genome shotgun sequence of line PN40024, scaffold_1.assembly12x (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr3G30520_001]

Coordinates

chr3:-:29226611..29229057

Molecular Weight (calculated)

47691.2 Da

IEP (calculated)

6.306

GRAVY (calculated)

0.001

Length

457 amino acids

Sequence
(BLAST)

001: MIDSHTVTNP KLWRRIEWKR TSESNTHRPP QASDSELIVG GGSHSYYYRS GVVSSSYLCS SSPSSPQVSA APVNAFTCGT LLTKVFAGSQ SFIGVNYGQV
101: ADNLPPPSAT ASLLQSTTIS KLRLYGADPA IIRSLSGTNI SLVLGVPNAD IPSLASDPSA AASWAAANVL PYVPATSISL VAVGNEALDS GDAALASQLL
201: PAMRNLGSAV AASGVKVSTV HTMTVLAHSE PPSSGAFRPE LSADLTGILG FLRDTGSPFM INPYPFFAYR SDPRPETLAF CLFQPNPGRF DAGSKLMYTN
301: MFDAQVDAVR SALDGLGAFT GNLVAHLRSL VGTPLMPGRS VDTYIFALYD EDLKPGPASE RFFGLYRADQ TMNYDAGLVK SASSSYTSPS PPAATTGSTP
401: PAATTGRCVP GATPHTSADG GPTQPEEQCH SPDAVGSRAA VGADRLFFLS VALTLLL

Best Arabidopsis Sequence Match ( AT2G16230.1 )
(BLAST)

001: MALSILFLLL FILFSISPSN AQSFIGVNYG LLSDNLPPPS QTAKLLQSTS IQKVRLYNAD SSIITSLVGT GIGIVIGVAN GDLPSIASDL NIASQWINSN
101: VLPFYPASNI ILINVGNEVL LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG LKGILQFLSD TGSPFAINPY
201: PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP
301: LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV
401: CFEPNNVASH TAYAMNLYFQ KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS SLYLARFIIS IYFFCLFPSL
501: RIM

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IKB3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.