Factsheet for PGSC0003DMT400001908

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g109570.2.1	Tomato	extracellular	98.51	97.89
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	74.47	71.43
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	69.15	70.81
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	68.72	70.37
KRH24481	Soybean	cytosol	50.0	65.28
PGSC0003DMT400013154	Potato	extracellular, vacuole	60.0	63.95
GSMUA_Achr7P08120_001	Banana	plastid	42.34	61.8
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	60.21	61.66
CDX75437	Canola	extracellular, plasma membrane, vacuole	66.17	61.46
CDX69064	Canola	extracellular, plasma membrane, vacuole	65.96	61.39
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	65.96	61.26
Bra039852.1-P	Field mustard	vacuole	60.21	60.73
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	64.47	60.12
AT2G16230.1	Thale cress	vacuole	62.13	58.05
Os03t0669300-02	Rice	endoplasmic reticulum	56.6	57.33
GSMUA_Achr7P26810_001	Banana	plastid	35.96	57.09
TraesCS4B01G020100.1	Wheat	extracellular	56.17	57.02
CDY26761	Canola	vacuole	61.49	56.45
CDY37244	Canola	vacuole	61.28	56.25
TraesCS4A01G293500.1	Wheat	plasma membrane	55.96	56.2
Bra017659.1-P	Field mustard	vacuole	65.53	55.6
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	54.47	55.29
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	55.11	54.99
KXG37872	Sorghum	endoplasmic reticulum, extracellular, vacuole	55.53	54.95
Os03t0227400-01	Rice	plasma membrane	42.55	54.79
HORVU4Hr1G008950.1	Barley	vacuole	44.47	50.12
TraesCS4A01G077800.1	Wheat	vacuole	45.74	49.43
HORVU4Hr1G065340.1	Barley	extracellular, vacuole	45.11	49.19
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	45.74	49.09
EER95211	Sorghum	extracellular, vacuole	45.11	49.07
TraesCS4D01G053700.1	Wheat	vacuole	44.04	48.94
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	55.74	48.88
TraesCS4B01G053700.2	Wheat	vacuole	43.4	48.8
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	43.4	48.8
Zm00001d013390_P001	Maize	extracellular	45.74	48.64
EER93548	Sorghum	vacuole	45.74	48.31
Os03t0722500-01	Rice	extracellular, plasma membrane, vacuole	44.89	47.1
PGSC0003DMT400078179	Potato	extracellular	44.89	47.1
GSMUA_Achr3P30520_001	Banana	cytosol, plastid, vacuole	45.11	46.39
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	44.47	45.34
PGSC0003DMT400047660	Potato	extracellular	35.32	43.46
PGSC0003DMT400008245	Potato	vacuole	40.21	40.91
Zm00001d028331_P001	Maize	plastid	44.68	40.38
PGSC0003DMT400037469	Potato	plasma membrane, vacuole	38.3	39.47
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	32.13	39.43
PGSC0003DMT400012898	Potato	cytosol	33.4	38.2
PGSC0003DMT400033482	Potato	extracellular, vacuole	38.3	37.97
PGSC0003DMT400001833	Potato	extracellular, vacuole	37.66	37.82
PGSC0003DMT400048136	Potato	cytosol, plastid, vacuole	28.51	37.64
PGSC0003DMT400031570	Potato	extracellular, vacuole	33.19	37.5
PGSC0003DMT400000943	Potato	extracellular, vacuole	39.15	37.1
PGSC0003DMT400060499	Potato	extracellular	39.36	36.71
PGSC0003DMT400033484	Potato	extracellular, vacuole	31.06	36.59
PGSC0003DMT400079432	Potato	extracellular, vacuole	29.57	35.64
PGSC0003DMT400015234	Potato	cytosol, peroxisome, plastid	28.09	35.58
PGSC0003DMT400075818	Potato	extracellular	35.11	32.67
PGSC0003DMT400081837	Potato	extracellular	33.83	31.93
PGSC0003DMT400022520	Potato	extracellular, vacuole	30.85	31.25
PGSC0003DMT400042484	Potato	extracellular, plasma membrane, vacuole	34.26	30.73
PGSC0003DMT400040463	Potato	mitochondrion, vacuole	32.34	26.9

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:AFU52647	ProteinID:AFU52647.1	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EMBL:JX838866	UniProt:M0ZJA6	PFAM:PF00332	PFAM:PF07983
EnsemblPlantsGene:PGSC0003DMG402000722	PGSC:PGSC0003DMG402000722	EnsemblPlants:PGSC0003DMT400001908	PANTHER:PTHR32227	PANTHER:PTHR32227:SF228	SMART:SM00768
SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI000295DB08	InterPro:X8	SEG:seg	:

Description

Glucan endo-1,3-beta-glucosidase [Source:PGSC_GENE;Acc:PGSC0003DMG402000722]

Coordinates

chr1:-:85878851..85885081

Molecular Weight (calculated)

49897.2 Da

IEP (calculated)

4.754

GRAVY (calculated)

-0.082

Length

470 amino acids

Sequence
(BLAST)

001: MAPQKLSSFF LIFLVLLQSL SSADSQAFIG VNYGQVADNL PPPAETVKLI QSTSIQKVRL YGADPAIIKA LANTGIGIVI GASNGDIPAL AADPNFAGQW
101: VNNNILAYYP ASKIIVVNVG NEVVTSGDQN LIPKLLPAMQ NVQNALNAAS LGGRIKVSTV HAMSILSQSD PPSSGLFSPV FGDSLKALLQ FHKENGSPLM
201: INPYPFFAYQ SDPRPETLAF CLFQPNAGRV DSGNGIKYMN MFDAQVDAVR SALNAWGFKE IQIVVAETGW PYKGDPNEVG PSMDNAKAYN GNLINHLRSM
301: VGTPLMPGIS VDTYIFALYD EDLKPGPGSE RSFGLFKPDL STTYDAGLSK NSQTPTAPVT PAPATPTTPV TPAPKPTGSA TWCLPKPGIP DSELQSNLDY
401: ACSMGIDCSP IQEGGPCFEP NTVASHAAYA MNVLYQTAGR NPWNCDFSQT ASLTSTNPSY NGCTYPGGNL

Best Arabidopsis Sequence Match ( AT4G34480.1 )
(BLAST)

001: MALSISIYFL LIFLSHFPSS HAEPFIGVNY GQVADNLPPP SETVKLLQST SIQKVRLYGA DPAIIKALAG TGVGIVIGAA NGDVPSLASD PNAATQWINS
101: NVLPFYPASK IMLITVGNEI LMSNDPNLVN QLLPAMQNVQ KALEAVSLGG KIKVSTVNSM TVLGSSDPPS SGSFAAGYQT GLKGILQFLS DTGSPFAINP
201: YPFFAYQSDP RPETLAFCLF EPNAGRVDSK TGIKYTNMFD AQVDAVHSAL KSMGFEKVEI VVAETGWASR GDANEVGASV DNAKAYNGNL IAHLRSMVGT
301: PLMPGKPVDT YIFALYDENL KPGPSSERAF GLFKTDLSMV YDVGLAKSSS SSQTPSGKVT SSGWCVPKKG ATNEELQASL DWACGHGIDC GAIQPGGACF
401: EPNNVVSHAA YAMNMYFQKS PKQPTDCDFS KTATVTSQNP SYNNCVYPGG GGGGGGGGGG SKAVMNKYVS SDKVEKKNGA TEPKVSSSLS FLLIFLSLIF
501: HVYM

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9M069]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.