Factsheet for TraesCS4B01G233900.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, vacuole

Predictor Summary:

mitochondrion 2
vacuole 1
plastid 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid, vacuole
Any Predictor:	mitochondrion, plasma membrane, plastid, vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	85.9	90.41
TraesCS4A01G077800.1	Wheat	vacuole	84.38	89.43
Os03t0227400-01	Rice	plasma membrane	63.99	80.82
HORVU4Hr1G065340.1	Barley	extracellular, vacuole	71.8	76.8
EER95211	Sorghum	extracellular, vacuole	70.93	75.69
Zm00001d028331_P001	Maize	plastid	69.63	61.73
TraesCS4B01G053700.2	Wheat	vacuole	47.94	52.87
GSMUA_Achr6P31650_001	Banana	extracellular, vacuole	48.37	48.58
TraesCS4B01G020100.1	Wheat	extracellular	47.72	47.52
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	45.99	46.19
KRH24481	Soybean	cytosol	36.01	46.11
Solyc04g080260.2.1	Tomato	extracellular	43.82	45.8
PGSC0003DMT400013154	Potato	extracellular, vacuole	43.6	45.58
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	45.34	45.53
Bra033641.1-P	Field mustard	extracellular, vacuole	42.52	45.37
CDY22386	Canola	extracellular, vacuole	42.52	45.37
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	45.34	44.95
PGSC0003DMT400001908	Potato	extracellular	45.34	44.47
CDX71547	Canola	extracellular, vacuole	41.65	44.04
Solyc01g109570.2.1	Tomato	extracellular	45.12	43.97
AT5G42720.1	Thale cress	extracellular, plasma membrane, vacuole	41.65	43.84
KRH15221	Soybean	extracellular	44.69	42.56
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	45.12	42.45
Bra039852.1-P	Field mustard	vacuole	41.87	41.42
CDX69064	Canola	extracellular, plasma membrane, vacuole	44.69	40.79
Bra011537.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.47	40.51
CDX75437	Canola	extracellular, plasma membrane, vacuole	44.47	40.51
AT4G34480.1	Thale cress	extracellular, plasma membrane, vacuole	44.25	40.48
AT2G16230.1	Thale cress	vacuole	42.52	38.97
CDY37244	Canola	vacuole	42.08	37.89
TraesCS7B01G233500.1	Wheat	extracellular	32.97	37.53
CDY26761	Canola	vacuole	41.65	37.5
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	31.24	36.83
Bra017659.1-P	Field mustard	vacuole	43.6	36.28
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	30.37	34.31
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	29.07	34.27
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	29.07	33.25
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	29.5	33.09
TraesCS2B01G459400.1	Wheat	extracellular	32.32	32.39
TraesCS4B01G225100.1	Wheat	vacuole	29.07	32.06
TraesCS4B01G142000.1	Wheat	golgi	31.89	31.82
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	27.98	31.77
TraesCS7B01G279900.1	Wheat	golgi, vacuole	27.33	31.58
TraesCS6B01G355600.1	Wheat	vacuole	32.32	31.17
TraesCS6B01G188000.1	Wheat	plastid	29.72	31.0
TraesCS7B01G153600.1	Wheat	vacuole	32.32	30.22
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	30.8	28.98
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	23.86	27.43
TraesCS4B01G242300.1	Wheat	extracellular	28.85	26.6
TraesCS5B01G279000.2	Wheat	extracellular	31.24	25.85
TraesCS3B01G311300.2	Wheat	vacuole	29.5	25.61
TraesCS2B01G220300.1	Wheat	plasma membrane	27.11	25.36
TraesCS7B01G285700.2	Wheat	extracellular	30.15	24.87
TraesCS2B01G241200.3	Wheat	endoplasmic reticulum, extracellular, vacuole	30.15	24.82
TraesCS5B01G153900.1	Wheat	plasma membrane	26.03	24.14
TraesCS2B01G274900.1	Wheat	plasma membrane	27.55	23.87
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	27.33	22.87
TraesCS1B01G454500.1	Wheat	vacuole	27.33	22.46
TraesCS1B01G453900.1	Wheat	vacuole	26.68	21.54

Protein Annotations

EnsemblPlants:TraesCS4B01G233900.2	EnsemblPlantsGene:TraesCS4B01G233900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF109	PFAM:PF00332	PFscan:PS51257	SEG:seg
SUPFAM:SSF51445	MapMan:50.3.2	:	:	:	:

Description

No Description!

Coordinates

chr4B:-:486283896..486285538

Molecular Weight (calculated)

47884.6 Da

IEP (calculated)

4.618

GRAVY (calculated)

0.072

Length

461 amino acids

Sequence
(BLAST)

001: MVSKLYNEWR VPLLPSLGIF ACMWAAQQYK IPMSIYNYRY APAGSVAFQK FASSQSFIGV NYGTLADNLS PAASTASLLT STSIGKLRLY EPQQDLVAAL
101: AGSNISILLG VPNSDVPSLA ASPAAAASWA AANIPTMVSV SAISVGNELL NSGDPTLGPQ LLPAMQNLLA ALPAGSTTKI STVHSMAVLA ASDPPSSGAF
201: HMDLAGSLDP VLDFLRQNGS PFMINPYPYF AYASDTRDET LAFCLFQPNP GRVDAGSGLN YMNMFDAQLD AVRAALDGKG YAGVDIVIAE TGWPYRGDAD
301: EAGATPDNAR AYNGNLVAHL RSQVGTPRTP GRSVDTYLFA LYDEDLKPGP VSERSFGLYQ ADLTANYDIG LAKGSASPST SGQIGVTATP AQAAPQAGRG
401: ATPAGYCVPT STVPGNTQQV QQQSSSCYVP GTAASPKGDA GVLLLVLFGA LLGLAMVAES R

Best Arabidopsis Sequence Match ( AT2G16230.1 )
(BLAST)

001: MALSILFLLL FILFSISPSN AQSFIGVNYG LLSDNLPPPS QTAKLLQSTS IQKVRLYNAD SSIITSLVGT GIGIVIGVAN GDLPSIASDL NIASQWINSN
101: VLPFYPASNI ILINVGNEVL LSNDLNLVNQ LLPAMQNVQK ALEAVSLGGK IKVSTVHAMT VLGNSEPPSA GSFAPSYQAG LKGILQFLSD TGSPFAINPY
201: PFFAYQSDPR PETLAFCLFQ PNPGRVDSNT GIKYMNMFDA QVDAVHSALK SIGFEKVEVL VAETGWPSTG DSNEVGPSVE NAKAYNGNLI AHLRSMVGTP
301: LMPGKSIDTY IFALFDENLK PGPSFEQSFG LFKPDLSMAY DIGLTKTTSS QTSQSPQLGK VTSMGWCVPK EDATQEQLQD SLDWVCGQGI DCGPIMPGGV
401: CFEPNNVASH TAYAMNLYFQ KSPENPTDCD FSKTARITSE NPSYSSCVYP RAGDGSITGE VTKYVTSDKA TEKNGSECFS SLYLARFIIS IYFFCLFPSL
501: RIM

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IKB3]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.