Factsheet for TraesCS2B01G241200.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	91.61	91.44
TraesCS7B01G285700.2	Wheat	extracellular	76.43	76.57
TraesCS2B01G241300.1	Wheat	extracellular, vacuole	72.68	73.87
TraesCS1B01G453900.1	Wheat	vacuole	61.61	60.42
Os07t0538000-01	Rice	extracellular	60.18	60.39
TraesCS1B01G454500.1	Wheat	vacuole	60.0	59.89
Os07t0539400-00	Rice	extracellular, plastid, vacuole	55.54	59.69
Os07t0539100-01	Rice	extracellular	56.43	57.14
Os08t0244500-00	Rice	extracellular	56.96	56.66
KXG36404	Sorghum	vacuole	57.14	56.44
Os07t0539900-01	Rice	extracellular	60.36	56.15
Os07t0539300-01	Rice	extracellular	57.32	55.63
EER99489	Sorghum	extracellular, vacuole	56.43	54.39
Zm00001d021690_P001	Maize	extracellular	56.61	54.28
TraesCS1B01G454200.1	Wheat	extracellular, vacuole	37.86	52.87
TraesCS6B01G355600.1	Wheat	vacuole	43.93	51.46
GSMUA_Achr8P22560_001	Banana	extracellular, vacuole	38.57	51.31
EER99491	Sorghum	extracellular, vacuole	60.18	50.98
GSMUA_Achr9P16150_001	Banana	cytosol, extracellular, plastid, vacuole	37.14	50.86
EER99488	Sorghum	extracellular, vacuole	45.36	50.8
Zm00001d021695_P001	Maize	extracellular	55.71	48.22
Zm00001d021697_P001	Maize	extracellular	59.11	47.63
Zm00001d006538_P001	Maize	vacuole	54.82	47.3
CDY20780	Canola	extracellular, vacuole	37.68	46.99
CDY06601	Canola	endoplasmic reticulum, extracellular	37.5	46.77
CDY36734	Canola	extracellular, vacuole	38.21	46.52
Bra035561.1-P	Field mustard	extracellular, vacuole	38.21	46.52
CDY17308	Canola	extracellular, vacuole	36.96	46.1
KRH14333	Soybean	endoplasmic reticulum, extracellular	37.86	45.99
CDY12009	Canola	extracellular, vacuole	37.68	45.87
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	38.39	45.65
CDY56498	Canola	extracellular, vacuole	35.89	45.48
KRH73361	Soybean	extracellular, vacuole	38.04	45.13
CDY19908	Canola	extracellular, vacuole	36.96	45.1
CDY46679	Canola	extracellular, vacuole	35.89	45.07
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	37.86	45.01
AT4G26830.2	Thale cress	endoplasmic reticulum, extracellular	36.79	44.88
CDY18049	Canola	extracellular, vacuole	35.36	44.8
CDX92794	Canola	endoplasmic reticulum, extracellular	36.07	44.79
PGSC0003DMT400033482	Potato	extracellular, vacuole	37.68	44.51
Bra002927.1-P	Field mustard	extracellular, vacuole	36.79	44.49
KRH73795	Soybean	extracellular, vacuole	37.32	44.28
AT2G05790.1	Thale cress	extracellular, vacuole	37.14	44.07
KRH14776	Soybean	extracellular, vacuole	37.5	44.03
Solyc07g049370.2.1	Tomato	extracellular, vacuole	36.61	43.8
Solyc12g014420.1.1	Tomato	extracellular	37.5	43.75
AT5G55180.2	Thale cress	endoplasmic reticulum, extracellular	36.07	43.44
PGSC0003DMT400001833	Potato	extracellular, vacuole	36.25	43.38
Bra015166.1-P	Field mustard	extracellular, vacuole	36.61	43.34
Bra019084.1-P	Field mustard	endoplasmic reticulum, extracellular	36.43	41.38
PGSC0003DMT400033484	Potato	extracellular, vacuole	29.11	40.85
TraesCS3B01G406200.2	Wheat	extracellular, plasma membrane, vacuole	27.5	37.75
TraesCS4B01G020100.1	Wheat	extracellular	30.71	37.15
Bra028988.1-P	Field mustard	extracellular, vacuole	37.86	36.87
TraesCS2B01G311200.1	Wheat	extracellular, plasma membrane, vacuole	25.18	36.06
TraesCS7B01G233500.1	Wheat	extracellular	25.89	35.8
TraesCS1B01G072500.1	Wheat	extracellular, vacuole	25.71	35.47
TraesCS3B01G278400.1	Wheat	extracellular, vacuole	24.46	35.04
TraesCS1B01G072600.1	Wheat	endoplasmic reticulum, extracellular, vacuole	24.64	34.24
TraesCS2B01G459400.1	Wheat	extracellular	28.04	34.13
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	25.0	34.06
TraesCS4B01G142000.1	Wheat	golgi	28.04	33.98
TraesCS4B01G225100.1	Wheat	vacuole	25.36	33.97
TraesCS7B01G279900.1	Wheat	golgi, vacuole	24.11	33.83
TraesCS2B01G220300.1	Wheat	plasma membrane	28.75	32.66
TraesCS3B01G311300.2	Wheat	vacuole	30.71	32.39
TraesCS5B01G153900.1	Wheat	plasma membrane	28.04	31.59
TraesCS4B01G242300.1	Wheat	extracellular	28.04	31.4
TraesCS4B01G053700.2	Wheat	vacuole	23.21	31.1
TraesCS7B01G153600.1	Wheat	vacuole	27.32	31.03
TraesCS2B01G274900.1	Wheat	plasma membrane	29.11	30.64
TraesCS4B01G233900.2	Wheat	plasma membrane, plastid, vacuole	24.82	30.15
TraesCS6B01G188000.1	Wheat	plastid	23.57	29.86
TraesCS5B01G279000.2	Wheat	extracellular	28.75	28.9
TraesCS5B01G329800.1	Wheat	endoplasmic reticulum, golgi, mitochondrion, vacuole	23.04	26.33

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
PFAM:PF00332	PFAM:PF07983	PANTHER:PTHR32227	PANTHER:PTHR32227:SF235	SMART:SM00768	SUPFAM:SSF51445
SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS2B01G241200	EnsemblPlants:TraesCS2B01G241200.3	InterPro:X8	SEG:seg

Description

No Description!

Coordinates

chr2B:+:245128960..245130899

Molecular Weight (calculated)

59623.2 Da

IEP (calculated)

6.596

GRAVY (calculated)

-0.095

Length

560 amino acids

Sequence
(BLAST)

001: MALTRLSRLL LLLLCAALPM LFFTCAEAGE VGVSYGRIGN NLMDPASVVQ LLKSNGITMV RVYDTDSTVL TAMKNTGIKL VVAVPNENVA LAAADPNWAV
101: QWAKNNLMPY YPATDIRGVT VGNEVFNQAK GLTSQLLPAM RNVQAALAGL GLADAVKVTT PIAFNALKKS FPPSKSLFQD DIAQSVMSPM IDFLEQTGSY
201: LMANIYPYYT YTSQSDTINL NYATFRPNDG VVDDGTGVRY DNLFDAQLDA VYYAIDNLRA SSTKRTVETL LRGAHRRHVP VVTGESGWCS YCPQAVGASK
301: ENAQAYNANL VKHVQSGGAS TTYSSLAVGA AAADISVYIF ALFNENDKPA DEQNFGLFYP SGQPVYAVDF RAGGSPSPGP TKSSWCVANA AVGDARLQAA
401: LDYACGNGAD CGAIQPGKPC YEPNTKVAHA SYAFNDYYQR KGRASGTCDF SGAASIVYQQ PAGICDPKTA GSWCVANAAV GDTRLQTALD YACGHGADCS
501: AIQRGARCFD PDTKVAHASY AFNDYYQHNG RSANSCNFNG AGSIVYQQPK IGNCVLPSTG

Best Arabidopsis Sequence Match ( AT2G05790.1 )
(BLAST)

001: MDLLTPLIFL LLLLSPFSLS DAGSIGVNYG RISDELPSAF KVVQLLKSQG ITRVKIFDAD PSVLKALSGS GIKVTVDLPN ELLFSAAKRT SFAVSWVKRN
101: VAAYHPSTQI ESIAVGNEVF VDTHNTTSFL IPAMRNIHKA LMSFNLHSDI KISSPLALSA LQNSYPSSSG SFRPELIDSV IKPMLDFLRE TGSRLMINVY
201: PFFAYEGNSD VIPLDYALLR ENPGMVDSGN GLRYFNLFDA QIDAVFAAMS ALKYDDIEII VTETGWPSKG DENEVGATLA NAASYNGNLI RRILTRGGTP
301: LRPKADLTVY LFALFNENKK LGPTSERNYG LFFPDEKKVY DIPFTTEGLK HYRDGGHTPV TGGDQVTKPP MSGGVSKSLN GYTWCVANGD AGEERLQGGL
401: DYACGEGGAD CRPIQPGANC YSPDTLEAHA SFAFNSYYQK KGRAGGSCYF GGAAYVVSQP PKYGRCEFPT GY

Arabidopsis Description

O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4IHD3]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.