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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • golgi 5
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 6
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, vacuole
Any Predictor:peroxisome, secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:peroxisome
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021697_P001 Maize extracellular 88.65 84.32
EER99489 Sorghum extracellular, vacuole 61.42 69.88
KXG36404 Sorghum vacuole 56.88 66.31
EER99488 Sorghum extracellular, vacuole 48.71 64.4
TraesCS7B01G285700.2 Wheat extracellular 52.8 62.43
TraesCS1D01G430700.1 Wheat extracellular, vacuole 51.59 60.57
TraesCS1B01G454500.1 Wheat vacuole 51.13 60.25
TraesCS2B01G241200.3 Wheat endoplasmic reticulum, extracellular, vacuole 50.98 60.18
HORVU7Hr1G091100.3 Barley vacuole 51.59 60.04
TraesCS2A01G216200.1 Wheat extracellular, vacuole 49.92 59.89
HORVU1Hr1G092310.2 Barley extracellular 51.13 59.82
TraesCS2D01G221800.1 Wheat extracellular, vacuole 49.77 59.82
TraesCS2B01G241300.1 Wheat extracellular, vacuole 49.77 59.71
TraesCS1D01G431200.1 Wheat extracellular, vacuole 50.38 59.68
TraesCS1B01G453900.1 Wheat vacuole 51.29 59.37
TraesCS1A01G422900.1 Wheat extracellular, vacuole 50.08 59.32
TraesCS1D01G431300.1 Wheat vacuole 51.29 59.06
HORVU2Hr1G044460.2 Barley vacuole 49.47 59.03
TraesCS1A01G422500.1 Wheat vacuole 50.83 58.95
EES07606 Sorghum extracellular, vacuole 43.57 58.66
HORVU1Hr1G092240.3 Barley extracellular, vacuole 52.04 58.6
HORVU2Hr1G044450.4 Barley extracellular, vacuole 49.32 58.11
Os07t0538000-01 Rice extracellular 49.02 58.06
Os07t0539400-00 Rice extracellular, plastid, vacuole 45.23 57.39
GSMUA_Achr8P22560_001 Banana extracellular, vacuole 35.7 56.06
Os08t0244500-00 Rice extracellular 47.35 55.59
GSMUA_Achr9P16150_001 Banana cytosol, extracellular, plastid, vacuole 34.34 55.5
Os07t0539100-01 Rice extracellular 45.23 54.07
Os07t0539300-01 Rice extracellular 46.29 53.03
TraesCS1B01G454200.1 Wheat extracellular, vacuole 32.07 52.87
Os07t0539900-01 Rice extracellular 47.81 52.49
TraesCS5A01G338400.3 Wheat endoplasmic reticulum, extracellular, vacuole 38.12 51.12
HORVU5Hr1G084900.2 Barley endoplasmic reticulum, extracellular, vacuole 37.07 50.94
CDY56498 Canola extracellular, vacuole 33.89 50.68
CDY06601 Canola endoplasmic reticulum, extracellular 34.19 50.33
CDY18049 Canola extracellular, vacuole 33.59 50.23
CDY20780 Canola extracellular, vacuole 34.04 50.11
CDY17308 Canola extracellular, vacuole 34.04 50.11
VIT_12s0059g01320.t01 Wine grape extracellular, vacuole 35.55 49.89
CDY36734 Canola extracellular, vacuole 34.64 49.78
Bra035561.1-P Field mustard extracellular, vacuole 34.49 49.57
CDY12009 Canola extracellular, vacuole 34.49 49.57
CDY46679 Canola extracellular, vacuole 33.43 49.55
CDY19908 Canola extracellular, vacuole 34.34 49.46
CDX92794 Canola endoplasmic reticulum, extracellular 33.74 49.45
AT2G05790.1 Thale cress extracellular, vacuole 34.64 48.52
VIT_19s0090g01070.t01 Wine grape extracellular, plasma membrane, vacuole 34.49 48.41
Bra002927.1-P Field mustard extracellular, vacuole 33.89 48.38
PGSC0003DMT400033482 Potato extracellular, vacuole 34.64 48.31
Bra015166.1-P Field mustard extracellular, vacuole 34.49 48.2
KRH14333 Soybean endoplasmic reticulum, extracellular 33.59 48.16
AT4G26830.2 Thale cress endoplasmic reticulum, extracellular 33.43 48.15
KRH73795 Soybean extracellular, vacuole 34.04 47.67
Solyc07g049370.2.1 Tomato extracellular, vacuole 33.74 47.65
AT5G55180.2 Thale cress endoplasmic reticulum, extracellular 33.43 47.53
Solyc12g014420.1.1 Tomato extracellular 34.34 47.29
PGSC0003DMT400001833 Potato extracellular, vacuole 33.43 47.22
KRH73361 Soybean extracellular, vacuole 33.43 46.82
KRH14776 Soybean extracellular, vacuole 33.43 46.33
Bra019084.1-P Field mustard endoplasmic reticulum, extracellular 33.59 45.03
PGSC0003DMT400033484 Potato extracellular, vacuole 26.63 44.11
Bra028988.1-P Field mustard extracellular, vacuole 34.04 39.13
EES01795 Sorghum extracellular, plasma membrane, vacuole 23.75 38.48
EES13119 Sorghum extracellular, vacuole 26.63 37.93
EES18301 Sorghum golgi, plasma membrane, vacuole 23.3 37.56
EES14212 Sorghum extracellular 27.23 37.19
EER88444 Sorghum extracellular, vacuole 22.84 37.01
EES01451 Sorghum extracellular, plasma membrane, vacuole 27.38 36.42
EER99139 Sorghum endoplasmic reticulum, plasma membrane 26.32 36.02
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 25.87 36.0
EES05179 Sorghum plastid 22.24 35.94
EER88625 Sorghum extracellular, plasma membrane, vacuole 20.57 34.69
EES10741 Sorghum golgi, plasma membrane, vacuole 21.48 34.63
EER90524 Sorghum extracellular 25.26 34.58
KXG38664 Sorghum extracellular, vacuole 22.69 34.56
KXG29738 Sorghum golgi, mitochondrion, vacuole 21.94 34.52
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 24.21 34.26
EER95256 Sorghum extracellular, plasma membrane, vacuole 25.57 33.67
OQU90151 Sorghum vacuole 24.36 32.59
KXG19201 Sorghum plastid 22.69 32.33
EER93548 Sorghum vacuole 21.63 32.13
KXG36295 Sorghum plasma membrane 25.87 31.61
EER95211 Sorghum extracellular, vacuole 20.57 31.48
KXG34744 Sorghum vacuole 21.94 28.66
OQU92921 Sorghum mitochondrion 23.15 13.99
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8084084UniProt:C5XAS6EnsemblPlants:EER99491
ProteinID:EER99491ProteinID:EER99491.1GO:GO:0003674GO:GO:0003824GO:GO:0004553GO:GO:0005488
GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150GO:GO:0008152
GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658InterPro:Glyco_hydro_17
InterPro:Glycoside_hydrolase_SFPFAM:PF00332PFAM:PF07983PANTHER:PTHR32227PANTHER:PTHR32227:SF235SMART:SM00768
EnsemblPlantsGene:SORBI_3002G328600SUPFAM:SSF51445unigene:Sbi.9237SignalP:SignalP-noTMUniParc:UPI0001A84140InterPro:X8
RefSeq:XP_002462970.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:69798871..69801868
Molecular Weight (calculated)
69380.4 Da
IEP (calculated)
4.827
GRAVY (calculated)
-0.200
Length
661 amino acids
Sequence
(BLAST)
001: MALAHFLGAA LPLLLLRAAE AAGEVGVNYG RVAYDLPDPA SVVQLLKQNG ITMVRLYDAN PKVLASLANT GIKVLVMLPN EELAAAASDP SYALRWARSN
101: VAAFYPATRI HGVSVGNEVF DSRPDLNADL VAAMTNVHDA LAQLGLADAV KVSTPVAFSA VTDSYPPSSG RFRDDIAQSV MKPMLGFLER TGSYLTINIY
201: PYLAYAEHPD QISLDYALGN SNPGVRVDDD DDDTAGLTLD DDDDNDGGGV TYYSLLDAQL DATYYAMDDL GFTSLKAHVG ETGHPSAGKP KTGRRPPRGG
301: RRHLMAGDDD GDGYPVASVA NAHAYVNNVI NRVLSGKTGT PHRPDADMDV YIFALFNENQ KGDGPDDIEQ NFGLFYPNEQ KVYEFDFHGG GGGGGAKASW
401: CVANAAVGDS RLQTALDYAC GHGADCSAIQ PGAACYEPNT KLAHASYAFN DYYQKNGRAS GTCDFAGAAN VVYQAPADTC NAAKAMSWCV ANTAVGDARL
501: QAALDYACGH GADCGAIQPG ATCFAPDTKA AHASYAFNDY YQRKGRASGT CDFAGAASVV YQQPAGACDA KSSWCVANAA VGDARLQAAL DYACGHGADC
601: SAIQPGATCF QPDTKAAHAS HAFNSYYQRN GRASGTCDFA GAASVVYQAP KIGNCMLPSR A
Best Arabidopsis Sequence Match ( AT4G26830.1 )
(BLAST)
001: MAVSFLPYFL ILSFLSAIDA HSGMVGVNYG RIANNLPSPE KVVNLLKSQG INRIKIFDTD KNVLTALANS KIKVIVALPN ELLSSAASHQ SFADNWIKTH
101: IMPYFPATEI EAIAVGNEVF VDPTITPYLV NAMKNIHTSL VKYKLDKAIK ISSPIALSAL ANSYPPSSGS FKPELIEPVV KPMLALLQQT SSYLMVNAYP
201: FFAYAANADK ISLDYALFKE NAGNIDSGTG LKYNSLFDAQ IDAVYAALSA VGFKGVKVMV TETGWPSVGD ENEIGASESN AAAYNAGLVK RVLTGKGTPL
301: RPTEPLNVYL FALFNENQKP GPTSERNYGL FYPNEGKVYN VPFTKKSTTP VNGNRGKVPV THEGHTWCVS NGEVAKEKLQ EALDYACGEG GADCRPIQPG
401: ATCYHPESLE AHASYAFNSY YQKNSRRVGT CFFGGAAHVV TQPPRYGKCE FPTGH
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:TAIR;Acc:AT4G26830]
SUBAcon: [extracellular,endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.