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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • nucleus 1
  • plastid 2
  • extracellular 4
  • golgi 3
  • plasma membrane 3
  • endoplasmic reticulum 3
  • vacuole 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:nucleus, plastid, secretory
BaCelLo:nucleus
ChloroP:plastid
iPSORT:secretory
MultiLoc:vacuole
Predotar:plastid
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d019248_P001 Maize extracellular, vacuole 85.18 86.55
Os07t0240200-01 Rice endoplasmic reticulum, extracellular, plasma membrane 66.21 66.87
TraesCSU01G239400.1 Wheat extracellular, vacuole 51.58 66.41
TraesCSU01G204400.1 Wheat extracellular, vacuole 51.58 66.41
TraesCS5D01G335600.1 Wheat vacuole 51.19 65.9
TraesCS5A01G329700.1 Wheat vacuole 51.19 65.9
TraesCS5D01G335500.1 Wheat golgi, plasma membrane, vacuole 57.11 61.23
TraesCS5A01G329600.1 Wheat extracellular, plasma membrane, vacuole 56.32 59.13
TraesCS5B01G329800.1 Wheat endoplasmic reticulum, golgi, mitochondrion, vacuole 55.93 57.76
HORVU5Hr1G083710.1 Barley golgi, mitochondrion, vacuole 56.32 56.66
GSMUA_Achr6P05040_001 Banana extracellular, vacuole 39.92 46.98
VIT_13s0019g01180.t01 Wine grape extracellular, vacuole 41.11 46.53
AT3G55430.1 Thale cress extracellular 39.33 44.32
CDY53692 Canola extracellular 38.34 43.21
CDY62387 Canola extracellular 38.34 43.21
CDY02936 Canola extracellular 38.54 43.14
CDX76097 Canola extracellular 38.34 43.02
Bra003212.1-P Field mustard extracellular 38.14 42.98
CDY41234 Canola extracellular 38.54 42.86
Bra007161.1-P Field mustard extracellular 38.34 42.83
CDY40218 Canola extracellular 38.34 42.83
Bra014747.1-P Field mustard extracellular 38.14 42.79
KRH01668 Soybean extracellular 38.54 42.76
Bra007162.1-P Field mustard extracellular 37.94 42.67
CDY40219 Canola extracellular 37.94 42.67
CDY41232 Canola extracellular 37.94 42.57
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 38.93 42.18
EES13119 Sorghum extracellular, vacuole 37.75 41.16
Solyc07g005330.2.1 Tomato extracellular 35.77 39.43
PGSC0003DMT400008245 Potato vacuole 35.77 39.18
PGSC0003DMT400060499 Potato extracellular 37.15 37.3
CDY20461 Canola extracellular 32.81 36.89
Bra005028.1-P Field mustard extracellular 32.61 36.83
CDY53600 Canola extracellular 32.41 36.44
EES05179 Sorghum plastid 29.45 36.43
Solyc05g054440.2.1 Tomato unclear 37.75 36.31
EES18301 Sorghum golgi, plasma membrane, vacuole 29.05 35.85
EES01795 Sorghum extracellular, plasma membrane, vacuole 28.85 35.78
EER95211 Sorghum extracellular, vacuole 30.24 35.42
EER88444 Sorghum extracellular, vacuole 28.26 35.05
EER93548 Sorghum vacuole 30.63 34.83
EES10741 Sorghum golgi, plasma membrane, vacuole 28.06 34.63
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 31.82 33.89
KXG38664 Sorghum extracellular, vacuole 28.46 33.18
EES07606 Sorghum extracellular, vacuole 31.23 32.18
EER88625 Sorghum extracellular, plasma membrane, vacuole 24.7 31.89
KXG29738 Sorghum golgi, mitochondrion, vacuole 25.69 30.95
AT2G39640.1 Thale cress endoplasmic reticulum, extracellular, vacuole 33.4 30.78
KXG19201 Sorghum plastid 27.67 30.17
EER90524 Sorghum extracellular 28.66 30.02
EER99488 Sorghum extracellular, vacuole 29.25 29.6
EES14212 Sorghum extracellular 28.06 29.34
EES01451 Sorghum extracellular, plasma membrane, vacuole 28.46 28.97
EER99139 Sorghum endoplasmic reticulum, plasma membrane 27.08 28.36
EER95256 Sorghum extracellular, plasma membrane, vacuole 26.09 26.29
EER99489 Sorghum extracellular, vacuole 29.25 25.47
KXG36295 Sorghum plasma membrane 26.28 24.58
KXG36404 Sorghum vacuole 26.88 23.99
OQU90151 Sorghum vacuole 23.12 23.68
EER99491 Sorghum extracellular, vacuole 28.66 21.94
OQU92921 Sorghum mitochondrion 26.88 12.43
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A1B6QA13GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016787GO:GO:0016798
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFEnsemblPlants:KXG34744ProteinID:KXG34744ProteinID:KXG34744.1PFAM:PF00332
ScanProsite:PS00587PANTHER:PTHR32227PANTHER:PTHR32227:SF62EnsemblPlantsGene:SORBI_3002G084700SUPFAM:SSF51445SignalP:SignalP-noTM
TMHMM:TMhelixUniParc:UPI0003C65189SEG:seg:::
Description
hypothetical protein
Coordinates
chr2:+:9022983..9025560
Molecular Weight (calculated)
51977.0 Da
IEP (calculated)
4.613
GRAVY (calculated)
-0.093
Length
506 amino acids
Sequence
(BLAST)
001: MAAPPSWQRH AAAAVVVSVS LLILVVAPSS TTAIGVNYGT KGDNLPPPAT VASFLANRTR IDRVKLFDTN PDMVRAFAGT GIALMVTAGN GDIPKLATKD
101: GAAAWVSANV APYYPKTDIS LVLVGNEIMD TGDASLISNL VPAMRALRAA LVAAGFRKIR VSTPHSLGIL AGASEPPSAS RFRDGWDRAV FAPMLAFHRQ
201: SRSPFMVNPY PYFGYNGATL PYALARPDNK LGVTDPGTGI TYTSMFEAQL DSVYSAMKKL GFDDVEIAVG ETGWPTKAMD GQIGVSNADA AEYNRYLIGE
301: AGGGSGTPLM PKRTFETYIF ALFNENLKPG PVAERNFGLF YANLTPVYDV GLMKDGVKTG AAPAPAPAPA ATVASAPESK AAKKDEVEAA AAPEETDASA
401: STPAPSSVED EGSSEATGPS PSSEKGDSTD EDKTTEEEGG DAPPPAAAAA SGHADESSET VAKDGDAAGG GKTPAPAGAE SHGGNLRVPV SSVLTIALSS
501: LALVGI
Best Arabidopsis Sequence Match ( AT5G24318.4 )
(BLAST)
001: MNYVLPFFSL SMFTIVGVLL ILSTGSEASI GVNYGTLANN LPPPQQVAEF LLHSTVINRI RLFDTDPQIL QAFANTGIAV TVTVPNDQIP HLTNLSSAKQ
101: WISDHIQPHF PSTNIIRILV GNEVISTADH LLIRTLIPAM QSLHTALVSA SLHRRIQIST PHSLGTLTNS TPPSSAKFRR GYDAQVLKPL LSFLRSTSSP
201: FVVNPYPFFG YSIETLDFAL FRPNPGLFDQ HTKLLYTNML DAQLDSVYSA MDKLGFSDVE IVIGEIGWPS EGDIDQIGVD VDTAAEFNKN LIARVDSGTG
301: TPLMPNRTFE TYIFALFNEN LKSGPTSERN FGIFRSDLTP IYDIGILRPT VINHRRNSQH YLVSYMLTNL FL
Arabidopsis Description
O-Glycosyl hydrolases family 17 protein [Source:UniProtKB/TrEMBL;Acc:F4KH28]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.