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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, vacuole

Predictor Summary:
  • plastid 1
  • mitochondrion 4
  • vacuole 2
  • extracellular 1
  • endoplasmic reticulum 1
  • plasma membrane 1
  • golgi 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d015783_P001 Maize golgi, plasma membrane, vacuole 94.05 94.5
Os02t0200300-02 Rice golgi, mitochondrion, vacuole 71.9 71.23
EER88625 Sorghum extracellular, plasma membrane, vacuole 64.29 68.88
HORVU6Hr1G032490.1 Barley plastid 67.38 63.45
TraesCS6B01G188000.1 Wheat plastid 66.67 63.35
TraesCS6D01G148900.1 Wheat plastid 66.43 62.98
TraesCS6A01G164100.1 Wheat plastid 64.52 61.87
EES05179 Sorghum plastid 38.81 39.85
EER88444 Sorghum extracellular, vacuole 38.57 39.71
EES10741 Sorghum golgi, plasma membrane, vacuole 38.33 39.27
EES01795 Sorghum extracellular, plasma membrane, vacuole 38.1 39.22
EES18301 Sorghum golgi, plasma membrane, vacuole 37.38 38.29
KXG38664 Sorghum extracellular, vacuole 36.67 35.48
EER95211 Sorghum extracellular, vacuole 35.0 34.03
KXG19201 Sorghum plastid 36.9 33.41
EES07606 Sorghum extracellular, vacuole 38.57 32.99
EER93548 Sorghum vacuole 34.76 32.81
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 36.43 32.21
EER99488 Sorghum extracellular, vacuole 35.48 29.8
EES14212 Sorghum extracellular 34.05 29.55
EES13119 Sorghum extracellular, vacuole 32.38 29.31
EES01451 Sorghum extracellular, plasma membrane, vacuole 34.52 29.18
EER90524 Sorghum extracellular 32.86 28.57
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 30.95 27.84
EER99139 Sorghum endoplasmic reticulum, plasma membrane 31.43 27.33
EER95256 Sorghum extracellular, plasma membrane, vacuole 31.19 26.1
KXG34744 Sorghum vacuole 30.95 25.69
KXG36404 Sorghum vacuole 33.57 24.87
OQU90151 Sorghum vacuole 29.05 24.7
EER99489 Sorghum extracellular, vacuole 34.05 24.61
KXG36295 Sorghum plasma membrane 30.0 23.29
EER99491 Sorghum extracellular, vacuole 34.52 21.94
OQU92921 Sorghum mitochondrion 36.9 14.17
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2UniProt:A0A194YND1GO:GO:0003674GO:GO:0003824
GO:GO:0004553GO:GO:0005575GO:GO:0005975GO:GO:0008150GO:GO:0008152GO:GO:0016020
GO:GO:0016021GO:GO:0016787InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFEnsemblPlants:KXG29738ProteinID:KXG29738
ProteinID:KXG29738.1PFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF223EnsemblPlantsGene:SORBI_3004G083100SUPFAM:SSF51445
SignalP:SignalP-noTMTMHMM:TMhelixUniParc:UPI0007F29B98SEG:seg::
Description
hypothetical protein
Coordinates
chr4:-:6838579..6841251
Molecular Weight (calculated)
46157.6 Da
IEP (calculated)
8.329
GRAVY (calculated)
-0.036
Length
420 amino acids
Sequence
(BLAST)
001: MAPPRWKSGD GRRRRLLLLL CCCLLAFPCH AQQITNTNTN ISHRSDQGGI HSFVGTYGIN YGRIADNLPP PEVVARLLKL AKIRNVKIYD AEHKVLDAFR
101: GTGLNLVVAI PNEFLKDMAA NPAKAMDWLN ENVQPYYPST RIVGITVGNE VLGGADTGLA EALVGAVLNV HDALRMLRLD AKIELSTPHS EAVFANSYPP
201: SACVFKDDLM VYLRPLLDFF SKTGAPFYVN AYPFLAYMSD PSHIDINYAL FKPNAGIVDP KTGLHYDNMF DAQLDAAYFA LEAAGYSGME VRVAETGWAS
301: AGDATEAGAN MENAVTYDRN LRKRLFLRKG TPYRPDRVAK AYIFALFNED LKPGPTSERH YGLFKPDGSV SINIGLKGLL PSSAPPHPLL PFKRVGAWGW
401: IVQYSAALLP CTLFFLALGT
Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)
001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.