Factsheet for HORVU6Hr1G032490.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
vacuole 4
mitochondrion 3
extracellular 2
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
EpiLoc:	vacuole
iPSORT:	mitochondrion
MultiLoc:	vacuole
Plant-mPloc:	extracellular, vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G148900.1	Wheat	plastid	95.07	95.71
TraesCS6B01G188000.1	Wheat	plastid	94.17	95.02
TraesCS6A01G164100.1	Wheat	plastid	92.83	94.52
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	67.04	70.52
KXG29738	Sorghum	golgi, mitochondrion, vacuole	63.45	67.38
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	62.78	66.99
HORVU0Hr1G021950.4	Barley	golgi, vacuole	50.9	56.75
HORVU3Hr1G084170.1	Barley	extracellular, vacuole	35.65	38.69
HORVU1Hr1G073820.3	Barley	mitochondrion, peroxisome, plastid, vacuole	37.67	36.92
HORVU3Hr1G067280.5	Barley	plasma membrane	34.98	36.62
HORVU1Hr1G010910.2	Barley	extracellular, vacuole	32.51	35.19
HORVU4Hr1G063240.7	Barley	golgi, vacuole	33.63	34.64
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	33.41	33.94
HORVU4Hr1G008950.1	Barley	vacuole	31.61	33.81
HORVU7Hr1G012550.1	Barley	vacuole	33.41	33.33
HORVU1Hr1G011210.1	Barley	vacuole	31.61	32.79
HORVU4Hr1G065340.1	Barley	extracellular, vacuole	30.94	32.02
HORVU2Hr1G072890.1	Barley	mitochondrion	35.43	29.59
HORVU3Hr1G070400.1	Barley	extracellular, vacuole	30.27	29.48
HORVU2Hr1G102010.1	Barley	golgi, mitochondrion, vacuole	22.42	28.41
HORVU5Hr1G084900.2	Barley	endoplasmic reticulum, extracellular, vacuole	29.82	27.65
HORVU4Hr1G003090.3	Barley	extracellular, vacuole	32.74	27.24
HORVU6Hr1G079630.2	Barley	mitochondrion, plastid, vacuole	32.74	26.99
HORVU4Hr1G027740.1	Barley	vacuole	30.04	26.85
HORVU5Hr1G075510.2	Barley	plasma membrane, vacuole	29.37	26.84
HORVU3Hr1G070440.12	Barley	plastid	30.49	26.15
HORVU5Hr1G083710.1	Barley	golgi, mitochondrion, vacuole	29.15	25.84
HORVU5Hr1G095380.1	Barley	cytosol	17.94	25.48
HORVU4Hr1G067180.3	Barley	extracellular, vacuole	28.7	25.4
HORVU7Hr1G091100.3	Barley	vacuole	31.84	25.0
HORVU2Hr1G044450.4	Barley	extracellular, vacuole	31.17	24.78
HORVU2Hr1G044460.2	Barley	vacuole	29.15	23.47
HORVU2Hr1G036980.5	Barley	plasma membrane	25.56	23.17
HORVU5Hr1G048630.2	Barley	plasma membrane, vacuole	25.34	22.78
HORVU1Hr1G092310.2	Barley	extracellular	28.25	22.3
HORVU1Hr1G092240.3	Barley	extracellular, vacuole	27.8	21.12
HORVU2Hr1G047410.3	Barley	vacuole	13.23	9.78

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005575	GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021
GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EnsemblPlantsGene:HORVU6Hr1G032490	EnsemblPlants:HORVU6Hr1G032490.1	UniProt:M0W8N3
PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF223	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI000296D2C8	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:-:142400821..142402854

Molecular Weight (calculated)

49033.1 Da

IEP (calculated)

9.739

GRAVY (calculated)

-0.024

Length

446 amino acids

Sequence
(BLAST)

001: MPCTSSKVAP RPSSNARPAT GHSLLLLSLL QSSRALLASC SPPRRKIMAV TPRGRPDSSL GHRRPVLLLI LFFCLLAFFP CRVAAFHSFV GTYGVNYGRI
101: ADNLPPPTEV VKLLRMARIK NVRIFDSDHT VLDAFRNSGL NLAIAIPNGL VKDISANPSK AMDWVNENVR PYYPSTRIVA IIVGNEILGG QDTGLAEALF
201: GAVVNIHDAL RTLRLSGRIE VNTPHSEAVF GTSYPPSAGT FRPDLMPYLK PLLDFFSKTG APFYVNAYPF LAYMSDPEHI DVNYALMKPN AGILDQKTNL
301: HYDNMFEAQI DATYAALEAA GYSDMEVRVS ETGWASAGDA TEPGATMENA RTYNFNLRKR LFLRKGTPYR PKRVVKAFIF ALFNEDLKTG PGSERHFGLF
401: KPDGSVSLDL GFKGLTSSSS SIKGWNILRY SATLFSCTFI FLALST

Best Arabidopsis Sequence Match ( AT3G15800.1 )
(BLAST)

001: MGYCVPLRKS PTSHMVFSSF FLSFLLVFSI LSSQTAVAFI GTYGVNYGRI ADNLPSPDAV ATLLKSAKIR NTRIYDADHS VLTAFRGTGI EIIVGLGNEF
101: LKDISVGEDR AMNWIKENVE PFIRGGTKIS GIAVGNEILG GTDIGLWEAL LPAAKNVYSA LRRLGLHNVV EVSSPHSEAV FANSYPPSSC TFRDDVAPFM
201: KPLLAFFWQI QSPFYINAYP FLAYKSDPIT IDINYALFEH NKGILDPKTK LHYDNMFDAM VDASYAALEK AGYTKVPVIV SETGWASKGD ADEPGASVKN
301: ARTYNRNLRK RLQKRKGTPY RPDMVVRAYV FALFNENSKP GPTSERNFGL FKPDGTIAYD IGLTGLKSSS ATRYRFKSSL VSASAFTCLL LLFHRLFHL

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4J030]
SUBAcon: [golgi,plastid,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.