Factsheet for TraesCS6D01G148900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid, secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	vacuole
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G188000.1	Wheat	plastid	98.65	98.87
TraesCS6A01G164100.1	Wheat	plastid	95.26	96.35
HORVU6Hr1G032490.1	Barley	plastid	95.71	95.07
Os02t0200300-02	Rice	golgi, mitochondrion, vacuole	66.37	69.34
KXG29738	Sorghum	golgi, mitochondrion, vacuole	62.98	66.43
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	62.3	66.03
TraesCS7D01G374900.1	Wheat	plastid, vacuole	52.82	52.94
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	37.02	40.29
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	35.21	40.0
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	36.34	39.75
TraesCS4D01G225700.1	Wheat	vacuole	35.67	37.8
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	34.09	37.28
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	33.41	36.54
TraesCS3D01G249500.1	Wheat	vacuole	34.99	36.05
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	34.76	35.9
TraesCS4D01G053700.1	Wheat	vacuole	32.28	33.81
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	31.83	32.19
TraesCS5D01G335600.1	Wheat	vacuole	28.44	32.06
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	32.96	31.0
TraesCS6D01G305000.1	Wheat	extracellular	33.41	30.9
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	29.12	28.73
TraesCS2D01G436800.1	Wheat	vacuole	25.28	28.43
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	29.57	27.87
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	29.35	27.54
TraesCS5D01G400400.1	Wheat	extracellular	30.47	27.33
TraesCS3D01G277300.4	Wheat	vacuole	30.93	25.85
TraesCS4D01G241900.1	Wheat	extracellular	28.67	25.4
TraesCS2D01G230900.1	Wheat	plasma membrane	29.12	24.25
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	26.19	23.53
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	28.67	23.09
TraesCS1D01G431300.1	Wheat	vacuole	29.12	22.47
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	27.77	22.04
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	27.99	22.02
TraesCS5D01G160700.1	Wheat	plasma membrane	25.96	21.99
TraesCS2D01G200900.1	Wheat	plastid	0.0	0.0

Protein Annotations

EnsemblPlants:TraesCS6D01G148900.1	EnsemblPlantsGene:TraesCS6D01G148900	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF223	PFAM:PF00332	SEG:seg	SUPFAM:SSF51445
MapMan:50.3.2	:	:	:	:	:

Description

No Description!

Coordinates

chr6D:+:122730548..122731980

Molecular Weight (calculated)

48638.7 Da

IEP (calculated)

9.876

GRAVY (calculated)

-0.051

Length

443 amino acids

Sequence
(BLAST)

001: MPCTSSKVAP RPSSNAPPTT GHSLLLLQSP PKLPATCSPP RRKIMAVIPR GRPDSSLGHR RPVLLLLLFF CLLAFFPRRV AAFHSFVGTY GVNYGRIADN
101: LPPPTEVVKL LQMARIKNVR IFDSDHTVLD AFRNSGLNLA IAIPNGLVKD ISATPSKAMD WVNENVRPYY PATRIVAIIV GNEILGGQDT GLAEALFGAV
201: VNIHDALRAM RLSGRIEVNT PHSEAVFGTS YPPSAGTFRP DLMPYLKPLL DFFSKTGAPF YVNAYPFLAY MSDPEHIDVN YALMKPNAGI LDQKTNLHYD
301: NMFEAQIDAT YAALEAAGYS DMEVRVSETG WASAGDATEP GATLENARTY NFNLRKRLFL RKGTPYRPKR VVKAFIFALF NEDLKTGPGS ERHFGLFKPD
401: GSVSLDLGFK GLTSSSSSIK GWKILRYSAT LLSSTFIFLA LST

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.