Factsheet for TraesCS1D01G275700.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, plasma membrane, endoplasmic reticulum, mitochondrion

Predictor Summary:

vacuole 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole
Any Predictor:	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	96.56	95.62
TraesCS1A01G276200.1	Wheat	vacuole	94.35	93.66
HORVU1Hr1G073820.3	Barley	mitochondrion, peroxisome, plastid, vacuole	86.98	77.8
EES18301	Sorghum	golgi, plasma membrane, vacuole	74.2	73.66
Zm00001d010137_P001	Maize	extracellular	72.97	73.33
TraesCS3D01G366700.2	Wheat	endoplasmic reticulum, vacuole	62.41	62.72
GSMUA_Achr11P...	Banana	vacuole	53.56	56.62
Solyc11g068440.1.1	Tomato	extracellular	52.33	56.05
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	52.58	55.87
KRH25239	Soybean	extracellular, plasma membrane, vacuole	53.81	55.87
KRH22675	Soybean	vacuole	53.56	55.61
KRH30421	Soybean	extracellular, plasma membrane, vacuole	52.83	54.71
TraesCS2D01G292500.1	Wheat	extracellular, plasma membrane, vacuole	52.09	54.36
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	52.58	52.2
KRH26646	Soybean	extracellular, plasma membrane, vacuole	53.56	51.05
CDY04498	Canola	extracellular, vacuole	47.91	50.52
Bra000508.1-P	Field mustard	extracellular, vacuole	47.67	49.74
CDY31181	Canola	extracellular, vacuole	47.67	49.74
CDX83270	Canola	extracellular, vacuole	47.67	49.74
AT2G27500.1	Thale cress	vacuole	47.67	49.49
Bra012015.1-P	Field mustard	plasma membrane, vacuole	48.16	47.0
TraesCS3D01G249500.1	Wheat	vacuole	49.14	46.51
TraesCS1D01G056500.1	Wheat	extracellular, vacuole	44.72	44.94
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	43.98	44.2
TraesCS7D01G065400.1	Wheat	extracellular, vacuole	45.7	43.36
CDX71449	Canola	plasma membrane, vacuole	47.67	42.73
TraesCS4D01G225700.1	Wheat	vacuole	42.51	41.39
TraesCS6D01G148900.1	Wheat	plastid	40.29	37.02
TraesCS4D01G053700.1	Wheat	vacuole	37.84	36.41
TraesCS7D01G374900.1	Wheat	plastid, vacuole	39.07	35.97
TraesCS6D01G305000.1	Wheat	extracellular	42.26	35.91
TraesCS5D01G335600.1	Wheat	vacuole	31.94	33.08
TraesCS4D01G235000.1	Wheat	plasma membrane, vacuole	35.14	32.65
TraesCS7D01G257600.1	Wheat	extracellular, vacuole	36.12	31.28
TraesCS4D01G136800.1	Wheat	cytosol, extracellular, plastid, vacuole	34.15	30.96
TraesCS4D01G018300.1	Wheat	plasma membrane, vacuole	35.63	30.79
TraesCS5D01G400400.1	Wheat	extracellular	35.87	29.55
TraesCS5D01G335500.1	Wheat	golgi, plasma membrane, vacuole	33.42	28.81
TraesCS2D01G436800.1	Wheat	vacuole	27.27	28.17
TraesCS3D01G277300.4	Wheat	vacuole	35.38	27.17
TraesCS4D01G241900.1	Wheat	extracellular	31.7	25.8
TraesCS1D01G431200.1	Wheat	extracellular, vacuole	34.64	25.27
TraesCS2D01G230900.1	Wheat	plasma membrane	32.68	25.0
TraesCS2D01G201000.1	Wheat	extracellular, plasma membrane, vacuole	30.22	24.95
TraesCS2D01G221800.1	Wheat	extracellular, vacuole	33.66	24.91
TraesCS1D01G431300.1	Wheat	vacuole	34.89	24.74
TraesCS1D01G430700.1	Wheat	extracellular, vacuole	34.15	24.69
TraesCS5D01G160700.1	Wheat	plasma membrane	28.99	22.56
TraesCS2D01G200900.1	Wheat	plastid	0.0	0.0

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF143	SUPFAM:SSF51445	SignalP:SignalP-noTM	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS1D01G275700	EnsemblPlants:TraesCS1D01G275700.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1D:-:371741163..371743410

Molecular Weight (calculated)

43270.5 Da

IEP (calculated)

4.643

GRAVY (calculated)

0.113

Length

407 amino acids

Sequence
(BLAST)

001: MRARDDAPME RRMIAAGRRF FDSSSSLLLL CLLLSLLSAN NGIVSAATAP LKFGINYGQI ANNLPHPAQV SGLLRSLNVN RVKLYDADPA VLTAFAGTGV
101: EFTISNGDLL NMSDARNARA WVAQNVQPFL PDTRITCVIL GNEVLSGTDA SAMQSLLPAM QAVHQALVDL GLDDQVNVST SQSVNVLASS YPPSAGTFRE
201: DLAQYMRPLL DFLAELGSPF LINAYPFFAY KASPGSVSLP YVLFEPNPGA HDPGTNLTYD NMLYAQIDAV YAAMEAMGHK DIAVRISETG WPSAGDADEV
301: GATVQNAATY NGNLMKRVAA GQGTPLRPDV PVDVLVFALF NENMKQGQAS ERNYGLFYPN GTSVYDLGFG GASFGPSSPT ASGFSSSSKP TISFPVGVVV
401: LFAAFLL

Best Arabidopsis Sequence Match ( AT5G42100.2 )
(BLAST)

001: MASSSLQSLF SLFCLALFSL PLIVSSIGIN YGQVANNLPP PKNVIPLLKS VGATKVKLYD ADPQALRAFA GSGFELTVAL GNEYLAQMSD PIKAQGWVKE
101: NVQAYLPNTK IVAIVVGNEV LTSNQSALTA ALFPAMQSIH GALVDCGLNK QIFVTTAHSL AILDVSYPPS ATSFRRDLLG SLTPILDFHV KTGSPILINA
201: YPFFAYEENP KHVSLDFVLF QPNQGFTDPG SNFHYDNMLF AQVDAVYHAL DAVGISYKKV PIVVSETGWP SNGDPQEVGA TCDNARKYNG NLIKMMMSKK
301: MRTPIRPECD LTIFVFALFN ENMKPGPTSE RNYGLFNPDG TPVYSLGIKT SSTHSSGSGS SNSTGGSSSG GGGNTGGSSS GGGIYQPVTG NPSPDYMSIS
401: SAGVTFSTLH FICCFTLTIF VDI

Arabidopsis Description

ATBG_PPAPGlucan endo-1,3-beta-glucosidase 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9FHX5]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.