Factsheet for TraesCS1A01G276200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

vacuole 3
extracellular 1
endoplasmic reticulum 2
plasma membrane 1
golgi 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	endoplasmic reticulum, mitochondrion, vacuole
MultiLoc:	vacuole
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G285400.2	Wheat	mitochondrion, plasma membrane, plastid, vacuole	94.88	94.65
TraesCS1D01G275700.1	Wheat	endoplasmic reticulum, mitochondrion, plasma membrane, vacuole	93.66	94.35
HORVU1Hr1G073820.3	Barley	mitochondrion, peroxisome, plastid, vacuole	87.32	78.68
EES18301	Sorghum	golgi, plasma membrane, vacuole	73.41	73.41
Zm00001d010137_P001	Maize	extracellular	72.44	73.33
TraesCS3A01G374000.2	Wheat	endoplasmic reticulum, extracellular	62.93	63.24
GSMUA_Achr11P...	Banana	vacuole	52.44	55.84
KRH25239	Soybean	extracellular, plasma membrane, vacuole	53.17	55.61
TraesCS2A01G294700.1	Wheat	plasma membrane	52.68	55.38
KRH22675	Soybean	vacuole	52.93	55.36
PGSC0003DMT400067771	Potato	extracellular, plasma membrane, vacuole	50.98	54.57
Solyc11g068440.1.1	Tomato	extracellular	50.49	54.47
KRH30421	Soybean	extracellular, plasma membrane, vacuole	52.2	54.45
TraesCS3A01G249500.1	Wheat	vacuole	49.76	51.78
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	50.98	50.98
KRH26646	Soybean	extracellular, plasma membrane, vacuole	52.93	50.82
CDY04498	Canola	extracellular, vacuole	47.56	50.52
Bra000508.1-P	Field mustard	extracellular, vacuole	47.07	49.49
CDX83270	Canola	extracellular, vacuole	47.07	49.49
CDY31181	Canola	extracellular, vacuole	47.07	49.49
AT2G27500.1	Thale cress	vacuole	47.07	49.23
Bra012015.1-P	Field mustard	plasma membrane, vacuole	47.8	47.0
TraesCS1A01G055900.1	Wheat	extracellular	32.44	46.02
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	44.15	44.69
TraesCS7A01G069700.1	Wheat	extracellular, vacuole	45.37	43.36
TraesCS1A01G049800.1	Wheat	extracellular, vacuole	42.68	43.1
CDX71449	Canola	plasma membrane, vacuole	47.32	42.73
TraesCS4A01G067900.1	Wheat	vacuole	41.95	41.15
TraesCS7A01G378100.1	Wheat	golgi, vacuole	39.27	40.35
TraesCS4A01G260900.2	Wheat	extracellular, plasma membrane, vacuole	37.8	37.08
TraesCS1A01G046000.1	Wheat	extracellular, vacuole	32.68	36.91
TraesCS6A01G164100.1	Wheat	plastid	39.27	36.76
TraesCS6A01G325300.1	Wheat	cytosol, extracellular, vacuole	40.98	36.13
TraesCS5A01G329700.1	Wheat	vacuole	31.46	32.82
TraesCS4A01G077800.1	Wheat	vacuole	33.9	31.95
TraesCS4A01G293500.1	Wheat	plasma membrane	35.61	31.2
TraesCS2A01G439500.1	Wheat	extracellular	33.9	30.22
TraesCS7A01G256800.1	Wheat	vacuole	36.1	29.96
TraesCS4A01G175900.1	Wheat	extracellular	33.66	29.93
TraesCS5A01G390600.1	Wheat	extracellular	35.12	29.15
TraesCS5A01G338400.3	Wheat	endoplasmic reticulum, extracellular, vacuole	34.39	28.6
TraesCS3A01G277100.2	Wheat	vacuole	34.39	28.54
TraesCS5A01G329600.1	Wheat	extracellular, plasma membrane, vacuole	32.93	28.01
TraesCS2A01G216200.1	Wheat	extracellular, vacuole	33.17	24.68
TraesCS2A01G224900.1	Wheat	plasma membrane, vacuole	31.95	24.62
TraesCS4A01G064900.2	Wheat	extracellular, plasma membrane, vacuole	31.71	24.62
TraesCS1A01G422900.1	Wheat	extracellular, vacuole	33.41	24.55
TraesCS2A01G186900.1	Wheat	extracellular, plasma membrane, vacuole	29.27	24.34
TraesCS5A01G155600.1	Wheat	plasma membrane	28.78	23.74
TraesCS1A01G422500.1	Wheat	vacuole	32.93	23.68

Protein Annotations

EnsemblPlants:TraesCS1A01G276200.1	EnsemblPlantsGene:TraesCS1A01G276200	Gene3D:3.20.20.80	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF
KEGG:00500+3.2.1.39	PANTHER:PTHR32227	PANTHER:PTHR32227:SF143	PFAM:PF00332	SEG:seg	SignalP:SignalP-noTM
SUPFAM:SSF51445	TMHMM:TMhelix	MapMan:50.3.2	:	:	:

Description

No Description!

Coordinates

chr1A:-:471480861..471483081

Molecular Weight (calculated)

43624.0 Da

IEP (calculated)

4.649

GRAVY (calculated)

0.129

Length

410 amino acids

Sequence
(BLAST)

001: MRARDDAPME RRMIAAARRF LFFDPSSSSL LLCLLLSLLS ANNGIVSAAN APLKFGINYG QIANNLPHPA QVSGLIRSLN ANRVKLYDAD PAVLTAFAGT
101: GVEFTISNGD LLNMSDAGNA RAWVAQNVQP FLPDTRITCV ILGNEVLSGT DAAAMQSLLP AMQAVHQALV DLGLDGQVNV STSQSVNVLA SSYPPSAGAF
201: REEVVQYMRP LLDFLAEVGS PFLINAYPFF AYKASPGSVS LPYVLFEPNP GAHDPGTNLT YDNMLYAQID AVYAAMEAMG HKDIAVRISE TGWPSAGDAD
301: EVGATVQNAA TYNGNLMKRV AAGQGTPLRP DVPVDVLVFA LFNENMKNGQ ASERNYGLFY PNGTSVYDLG FDAASFSPSP RASGFSSSSK PTMQMSFPVG
401: VVVLLAAFLL

Best Arabidopsis Sequence Match ( AT1G32860.1 )
(BLAST)

001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL

Arabidopsis Description

Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.