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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:
  • nucleus 1
  • plastid 1
  • vacuole 4
  • mitochondrion 1
  • extracellular 3
  • endoplasmic reticulum 2
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d010137_P001 Maize extracellular 87.07 88.15
TraesCS1D01G275700.1 Wheat endoplasmic reticulum, mitochondrion, plasma membrane, vacuole 73.66 74.2
TraesCS1B01G285400.2 Wheat mitochondrion, plasma membrane, plastid, vacuole 73.9 73.72
TraesCS1A01G276200.1 Wheat vacuole 73.41 73.41
EES01795 Sorghum extracellular, plasma membrane, vacuole 66.83 67.16
HORVU1Hr1G073820.3 Barley mitochondrion, peroxisome, plastid, vacuole 73.41 66.15
GSMUA_Achr11P... Banana vacuole 57.56 61.3
KRH22675 Soybean vacuole 58.05 60.71
PGSC0003DMT400067771 Potato extracellular, plasma membrane, vacuole 56.1 60.05
Solyc11g068440.1.1 Tomato extracellular 55.37 59.74
KRH25239 Soybean extracellular, plasma membrane, vacuole 56.34 58.93
KRH30421 Soybean extracellular, plasma membrane, vacuole 54.39 56.74
CDY04498 Canola extracellular, vacuole 51.95 55.18
KRH26646 Soybean extracellular, plasma membrane, vacuole 57.07 54.8
VIT_06s0080g00420.t01 Wine grape extracellular, mitochondrion, plastid, vacuole 54.15 54.15
AT2G27500.1 Thale cress vacuole 51.71 54.08
Bra000508.1-P Field mustard extracellular, vacuole 51.22 53.85
CDX83270 Canola extracellular, vacuole 51.22 53.85
CDY31181 Canola extracellular, vacuole 51.22 53.85
EES10741 Sorghum golgi, plasma membrane, vacuole 53.41 53.41
EES05179 Sorghum plastid 52.2 52.32
Bra012015.1-P Field mustard plasma membrane, vacuole 52.2 51.32
CDX71449 Canola plasma membrane, vacuole 50.98 46.04
EER88444 Sorghum extracellular, vacuole 43.17 43.38
EER88625 Sorghum extracellular, plasma membrane, vacuole 40.49 42.35
KXG38664 Sorghum extracellular, vacuole 43.66 41.24
KXG19201 Sorghum plastid 44.88 39.66
KXG29738 Sorghum golgi, mitochondrion, vacuole 38.29 37.38
EES07606 Sorghum extracellular, vacuole 42.93 35.85
EER93548 Sorghum vacuole 38.54 35.51
EER95211 Sorghum extracellular, vacuole 35.37 33.56
EES13119 Sorghum extracellular, vacuole 36.1 31.9
EER90524 Sorghum extracellular 37.56 31.88
KXG37872 Sorghum endoplasmic reticulum, extracellular, vacuole 35.85 30.95
EES10308 Sorghum endoplasmic reticulum, extracellular, vacuole 35.12 30.84
EES14212 Sorghum extracellular 36.1 30.58
EER99488 Sorghum extracellular, vacuole 36.83 30.2
EES01451 Sorghum extracellular, plasma membrane, vacuole 35.37 29.18
KXG34744 Sorghum vacuole 35.85 29.05
EER99139 Sorghum endoplasmic reticulum, plasma membrane 33.9 28.78
EER95256 Sorghum extracellular, plasma membrane, vacuole 35.12 28.69
EER99489 Sorghum extracellular, vacuole 37.8 26.68
KXG36404 Sorghum vacuole 35.61 25.75
OQU90151 Sorghum vacuole 30.49 25.3
KXG36295 Sorghum plasma membrane 32.93 24.95
EER99491 Sorghum extracellular, vacuole 37.56 23.3
OQU92921 Sorghum mitochondrion 44.15 16.54
Protein Annotations
KEGG:00500+3.2.1.39Gene3D:3.20.20.80MapMan:50.3.2EntrezGene:8058531UniProt:C5YYS5EnsemblPlants:EES18301
ProteinID:EES18301ProteinID:EES18301.2ProteinID:EES19610.1GO:GO:0003674GO:GO:0003824GO:GO:0004553
GO:GO:0005488GO:GO:0005575GO:GO:0005623GO:GO:0005886GO:GO:0005975GO:GO:0008150
GO:GO:0008152GO:GO:0016020GO:GO:0016787GO:GO:0030246GO:GO:0030247GO:GO:0046658
InterPro:Glyco_hydro_17InterPro:Glycoside_hydrolase_SFPFAM:PF00332PANTHER:PTHR32227PANTHER:PTHR32227:SF143EnsemblPlantsGene:SORBI_3009G154600
SUPFAM:SSF51445TMHMM:TMhelixUniParc:UPI0001A894F5RefSeq:XP_002441180.1SEG:seg:
Description
hypothetical protein
Coordinates
chr9:-:51130938..51136934
Molecular Weight (calculated)
43702.6 Da
IEP (calculated)
5.948
GRAVY (calculated)
0.227
Length
410 amino acids
Sequence
(BLAST)
001: MARADDHRTV TMRSSPLPPP RCVVVVLLLL LPLPLPLLSL LSAINVASAA TAAAPLKFGI NYGQIANNLP HPAQVSGLLQ SLNVNRVKLY DADPAVLTAF
101: AGTGVEFIVG NEDLFNLTDA RKARAWVAQH VQPFLPGTRI TCITVGNEVL SGKDTAAMQS LLPAMQAVYQ AVVALGLAGQ VNVSTAHSVN ILASSYPPSS
201: GAFREELAEY IQPILNFHAE VGSPFLINAY PFFAYKASPG TVSLPYVLFE PNAGVVDPNT NLTYDNMLYA QIDAVYAAMK AMGHTDLTVR ISETGWPSKG
301: DDDEVGATVA NAAAYNGNLM KRIAMGQGTP LKPRVPVDVF VFALFNEDMK PGPTSERNYG LFYPNGTQVY NLGFDGAAFS PSSPTYSSSS KLPAITFQMA
401: VVVLLAGFFL
Best Arabidopsis Sequence Match ( AT1G32860.1 )
(BLAST)
001: MELTSFHRSS LLFLISLTLI ILPTTTTSIG VNYGQIGDNL PSPTDVIPLI KSIGATKVKL YDANPQILKA FSNTGIEFII GLGNEYLSKM KDPSKALTWI
101: KQNVTPFLPA TNITCITIGN EILALNDSSL TTNLLPAMQG VHSALITAGL SDQISVTTAH SLSILKSSFP PSAGEFQPDL LDSLTPILEF HRKTDSPFLI
201: NAYPFFAYKG NPKEVPLDFV LFQPNQGIVD PATGFHYDNM LFAQIDAVYS ALAAAGFKSL RVEISETGWP SKGDDDEVGA TPENAKRYNG NLIKMMMSGK
301: KTKTPLKPNN DLSIYVFALF NENLKPGPTS ERNYGLFKPD GTQAYSLGFA LNDVVRGASG GGTGGGNSSS GGGRDKSPVF PVSPVAPDSA STGYLAISAS
401: PVTGKRKGKG AILSLVVSML LARHLL
Arabidopsis Description
Glucan endo-1,3-beta-glucosidase 11 [Source:UniProtKB/Swiss-Prot;Acc:Q8L868]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.