Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18340.1 | EER92405 | AT2G38310.1 | 19407142 |
| AT4G18340.1 | EES19683 | AT2G38310.1 | 19407142 |
| AT4G18340.1 | OQU87775 | AT2G38310.1 | 19407142 |
| AT4G18340.1 | OQU92088 | AT4G17870.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046134_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 92.65 | 92.87 |
| TraesCS7A01G349200.1 | Wheat | endoplasmic reticulum, extracellular | 74.51 | 75.06 |
| TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 74.51 | 75.06 |
| TraesCS7B01G233500.1 | Wheat | extracellular | 74.02 | 74.57 |
| HORVU7Hr1G079650.7 | Barley | extracellular, vacuole | 71.32 | 66.29 |
| VIT_10s0003g03690.t01 | Wine grape | extracellular | 55.88 | 60.8 |
| Os06t0531000-00 | Rice | vacuole | 71.08 | 58.47 |
| CDX99881 | Canola | extracellular, vacuole | 53.43 | 57.67 |
| Bra032357.1-P | Field mustard | extracellular, vacuole | 53.19 | 57.41 |
| Bra010800.1-P | Field mustard | vacuole | 52.45 | 56.02 |
| CDY26296 | Canola | extracellular, plasma membrane, vacuole | 53.43 | 54.64 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 53.19 | 54.39 |
| AT1G30080.1 | Thale cress | vacuole | 54.17 | 54.17 |
| CDY63842 | Canola | golgi, vacuole | 37.99 | 53.82 |
| CDX90225 | Canola | vacuole | 52.94 | 53.33 |
| KRH11184 | Soybean | endoplasmic reticulum, extracellular, vacuole | 51.96 | 53.27 |
| KRH21069 | Soybean | vacuole | 51.47 | 52.63 |
| CDX90405 | Canola | vacuole | 50.49 | 51.89 |
| Bra012604.1-P | Field mustard | vacuole | 50.49 | 51.89 |
| CDX99476 | Canola | vacuole | 50.98 | 51.87 |
| CDX78840 | Canola | vacuole | 50.98 | 51.87 |
| Bra013297.1-P | Field mustard | vacuole | 50.98 | 51.87 |
| AT4G18340.1 | Thale cress | vacuole | 50.25 | 51.64 |
| CDY01532 | Canola | vacuole | 50.25 | 51.64 |
| CDX76528 | Canola | extracellular, vacuole | 49.51 | 51.01 |
| KRG89350 | Soybean | extracellular, vacuole | 50.0 | 51.0 |
| CDY34065 | Canola | extracellular, vacuole | 49.02 | 49.51 |
| KRH50394 | Soybean | extracellular, vacuole | 50.74 | 47.59 |
| EES05179 | Sorghum | plastid | 44.85 | 44.74 |
| EES18301 | Sorghum | golgi, plasma membrane, vacuole | 43.38 | 43.17 |
| EES01795 | Sorghum | extracellular, plasma membrane, vacuole | 43.14 | 43.14 |
| EES10741 | Sorghum | golgi, plasma membrane, vacuole | 43.14 | 42.93 |
| KXG38664 | Sorghum | extracellular, vacuole | 42.4 | 39.86 |
| EER88625 | Sorghum | extracellular, plasma membrane, vacuole | 37.75 | 39.29 |
| KXG29738 | Sorghum | golgi, mitochondrion, vacuole | 39.71 | 38.57 |
| KXG19201 | Sorghum | plastid | 42.89 | 37.72 |
| EES07606 | Sorghum | extracellular, vacuole | 42.89 | 35.64 |
| KXG37872 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 40.2 | 34.53 |
| EER93548 | Sorghum | vacuole | 37.01 | 33.93 |
| EER95211 | Sorghum | extracellular, vacuole | 35.78 | 33.8 |
| EES14212 | Sorghum | extracellular | 38.97 | 32.85 |
| EES13119 | Sorghum | extracellular, vacuole | 36.03 | 31.68 |
| EER99488 | Sorghum | extracellular, vacuole | 38.24 | 31.2 |
| EER90524 | Sorghum | extracellular | 35.54 | 30.02 |
| EER99139 | Sorghum | endoplasmic reticulum, plasma membrane | 35.05 | 29.61 |
| EES01451 | Sorghum | extracellular, plasma membrane, vacuole | 36.03 | 29.58 |
| EES10308 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 32.84 | 28.69 |
| KXG34744 | Sorghum | vacuole | 35.05 | 28.26 |
| EER95256 | Sorghum | extracellular, plasma membrane, vacuole | 33.33 | 27.09 |
| EER99489 | Sorghum | extracellular, vacuole | 38.48 | 27.02 |
| KXG36404 | Sorghum | vacuole | 37.25 | 26.81 |
| KXG36295 | Sorghum | plasma membrane | 33.82 | 25.51 |
| OQU90151 | Sorghum | vacuole | 30.39 | 25.1 |
| EER99491 | Sorghum | extracellular, vacuole | 37.01 | 22.84 |
| OQU92921 | Sorghum | mitochondrion | 41.91 | 15.63 |
Protein Annotations
| KEGG:00500+3.2.1.39 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EntrezGene:8058864 | UniProt:C5Z3P6 | EnsemblPlants:EER88444 |
| ProteinID:EER88444 | ProteinID:EER88444.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 |
| InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF | PFAM:PF00332 | PANTHER:PTHR32227 | PANTHER:PTHR32227:SF85 | EnsemblPlantsGene:SORBI_3010G155500 |
| SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI0001A8912D | RefSeq:XP_002437077.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr10:+:45927793..45932448
Molecular Weight (calculated)
43723.7 Da
IEP (calculated)
6.790
GRAVY (calculated)
0.220
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MALFALSSLK PTSRLVIICA LLCIFLLSSE VSLVRQATAL GINYGQVGNN LPAPPQVVQL LSSLRIGKVR IYDVNPQVLT AFAGTGIELI VTVPDDLVPG
101: MAGSASQALQ WLSASVRPYF PAARVTGIAV GNEVFTGDDE QLKASLVPAM RNLHAALAQL GMDAYVRVST ANSLAVLATS YPPSQGVFTQ AAAPYMAQLL
201: RFLAETSAPF WINAYPYFAY KDDPTKVSLD YALSNPSHVG AVDPFTKLQY TSMLYAQVDA VTFAAARLGY GNVPVHVSET GWPSKGDADE AGATVENARQ
301: YNRNLLMRQV SGEGTPLRPR LRLEVYLFAL FNEDMKPGPT SERNYGLYQP DMSMVYNVGL SQLSTTNAAS LSLATSPAAR TTDVRKDFAG LSVAVSVAIL
401: LITQALLL
101: MAGSASQALQ WLSASVRPYF PAARVTGIAV GNEVFTGDDE QLKASLVPAM RNLHAALAQL GMDAYVRVST ANSLAVLATS YPPSQGVFTQ AAAPYMAQLL
201: RFLAETSAPF WINAYPYFAY KDDPTKVSLD YALSNPSHVG AVDPFTKLQY TSMLYAQVDA VTFAAARLGY GNVPVHVSET GWPSKGDADE AGATVENARQ
301: YNRNLLMRQV SGEGTPLRPR LRLEVYLFAL FNEDMKPGPT SERNYGLYQP DMSMVYNVGL SQLSTTNAAS LSLATSPAAR TTDVRKDFAG LSVAVSVAIL
401: LITQALLL
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.