Factsheet for VIT_10s0003g03690.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032357.1-P	Field mustard	extracellular, vacuole	69.33	68.78
Bra010800.1-P	Field mustard	vacuole	69.6	68.32
CDX99881	Canola	extracellular, vacuole	68.8	68.25
Solyc02g070450.1.1	Tomato	endoplasmic reticulum, extracellular, vacuole	71.2	66.92
KRH11184	Soybean	endoplasmic reticulum, extracellular, vacuole	70.13	66.08
KRH21069	Soybean	vacuole	70.13	65.91
CDY26296	Canola	extracellular, plasma membrane, vacuole	69.33	65.16
AT1G30080.1	Thale cress	vacuole	70.67	64.95
KRG89350	Soybean	extracellular, vacuole	69.07	64.75
CDX90225	Canola	vacuole	69.6	64.44
CDY63842	Canola	golgi, vacuole	49.33	64.24
KRH50394	Soybean	extracellular, vacuole	69.6	60.0
EER88444	Sorghum	extracellular, vacuole	60.8	55.88
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	60.53	55.77
TraesCS7A01G349200.1	Wheat	endoplasmic reticulum, extracellular	60.0	55.56
TraesCS7B01G233500.1	Wheat	extracellular	59.73	55.31
TraesCS7D01G329400.1	Wheat	endoplasmic reticulum, extracellular	59.73	55.31
HORVU7Hr1G079650.7	Barley	extracellular, vacuole	59.73	51.03
VIT_06s0080g00420.t01	Wine grape	extracellular, mitochondrion, plastid, vacuole	51.2	46.83
Os06t0531000-00	Rice	vacuole	59.73	45.16
VIT_02s0025g02770.t01	Wine grape	extracellular	48.0	44.44
VIT_09s0002g06880.t01	Wine grape	vacuole	43.2	40.6
VIT_06s0004g04750.t01	Wine grape	extracellular	37.87	39.44
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	40.27	38.32
VIT_18s0122g00980.t01	Wine grape	extracellular	45.07	36.74
VIT_12s0059g01320.t01	Wine grape	extracellular, vacuole	44.53	35.46
VIT_13s0019g01180.t01	Wine grape	extracellular, vacuole	42.13	35.35
VIT_18s0001g12390.t01	Wine grape	extracellular, vacuole	43.47	35.05
VIT_03s0063g02490.t01	Wine grape	endoplasmic reticulum, extracellular	44.27	33.88
VIT_19s0090g01070.t01	Wine grape	extracellular, plasma membrane, vacuole	42.4	33.76
VIT_16s0098g01560.t01	Wine grape	extracellular	41.07	33.41
VIT_11s0016g02960.t01	Wine grape	extracellular, vacuole	38.93	29.55
VIT_05s0062g01430.t01	Wine grape	extracellular, vacuole	34.93	28.05
VIT_06s0004g00720.t01	Wine grape	extracellular, vacuole	34.4	27.27
VIT_01s0011g05500.t01	Wine grape	extracellular, plasma membrane, vacuole	35.47	26.71
VIT_14s0006g00520.t01	Wine grape	extracellular, plasma membrane, vacuole	34.13	25.91
VIT_10s0116g01640.t01	Wine grape	extracellular, vacuole	33.33	22.05

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100258387	wikigene:100258387	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:CBI30910
ProteinID:CBI30910.3	UniProt:D7TK88	EMBL:FN595992	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553
GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016787	GO:GO:0030246	GO:GO:0030247	GO:GO:0046658
InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	EntrezGene:LOC100258387	wikigene:LOC100258387	PFAM:PF00332	PANTHER:PTHR32227
PANTHER:PTHR32227:SF85	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00015CAC2F	ArrayExpress:VIT_10s0003g03690	EnsemblPlantsGene:VIT_10s0003g03690
EnsemblPlants:VIT_10s0003g03690.t01	RefSeq:XP_002270153	RefSeq:XP_002270153.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr10:-:6192248..6193610

Molecular Weight (calculated)

41198.3 Da

IEP (calculated)

4.679

GRAVY (calculated)

0.011

Length

375 amino acids

Sequence
(BLAST)

001: MAATFMSRIS MFHAFILSAL FFSDCGFLRG VASFGINYGQ IGNNLPQPEK VLDLLSSLKI TKTKIYDTNP QILTAFANSG IELIVTVEND KLSDLTDPQQ
101: ALQWVSSRIK PYFPATKITG IAVGNEIFTG DDMTLMSYLV PAMISIHGAL VQLGLESYIQ VSTPNSLAVL AESYPPSAGS FQGELTGVMS QFLRFLSNTK
201: SPFWINAYPY FAYKDSPTQI SLDYVLFNPN SGMVDPYTKL HYDNMLYAQV DAVICAIARM GFEGLEVKVT ETGWPSKGDV DEVGATVENA AIYNRNLLRR
301: QLENEGTPLR PNMRLEVYLF ALFNEDLKPG PTSERNYGLY QPDGTMAYNV GLSALSTTSS TATISLTSSA TKVQP

Best Arabidopsis Sequence Match ( AT1G30080.1 )
(BLAST)

001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.