Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18340.1 | KRH00319 | AT2G38310.1 | 19407142 |
| AT4G18340.1 | KRH49452 | AT2G38310.1 | 19407142 |
| AT4G18340.1 | KRH76014 | AT2G38310.1 | 19407142 |
| AT4G18340.1 | KRH45453 | AT4G17870.1 | 19407142 |
| AT4G18340.1 | KRH75621 | AT4G17870.1 | 19407142 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH50394 | Soybean | extracellular, vacuole | 89.75 | 82.53 |
| KRH11184 | Soybean | endoplasmic reticulum, extracellular, vacuole | 73.75 | 74.12 |
| KRH21069 | Soybean | vacuole | 73.25 | 73.43 |
| VIT_10s0003g03690.t01 | Wine grape | extracellular | 64.75 | 69.07 |
| Solyc02g070450.1.1 | Tomato | endoplasmic reticulum, extracellular, vacuole | 61.75 | 61.9 |
| AT4G18340.1 | Thale cress | vacuole | 59.5 | 59.95 |
| CDX76528 | Canola | extracellular, vacuole | 58.5 | 59.09 |
| CDY01532 | Canola | vacuole | 58.25 | 58.69 |
| CDX90405 | Canola | vacuole | 58.25 | 58.69 |
| Bra012604.1-P | Field mustard | vacuole | 58.25 | 58.69 |
| CDX99476 | Canola | vacuole | 58.75 | 58.6 |
| CDX78840 | Canola | vacuole | 58.75 | 58.6 |
| Bra013297.1-P | Field mustard | vacuole | 58.25 | 58.1 |
| CDY34065 | Canola | extracellular, vacuole | 58.0 | 57.43 |
| TraesCS7A01G349200.1 | Wheat | endoplasmic reticulum, extracellular | 53.75 | 53.09 |
| TraesCS7B01G233500.1 | Wheat | extracellular | 53.5 | 52.84 |
| TraesCS7D01G329400.1 | Wheat | endoplasmic reticulum, extracellular | 53.25 | 52.59 |
| Zm00001d046134_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 52.0 | 51.11 |
| EER88444 | Sorghum | extracellular, vacuole | 51.0 | 50.0 |
| HORVU7Hr1G079650.7 | Barley | extracellular, vacuole | 52.75 | 48.06 |
| KRH22675 | Soybean | vacuole | 43.0 | 43.88 |
| KRH34248 | Soybean | extracellular, plasma membrane, vacuole | 44.25 | 42.75 |
| KRH25239 | Soybean | extracellular, plasma membrane, vacuole | 41.25 | 42.09 |
| KRH30421 | Soybean | extracellular, plasma membrane, vacuole | 41.25 | 41.98 |
| Os06t0531000-00 | Rice | vacuole | 52.0 | 41.94 |
| KRH47445 | Soybean | extracellular, vacuole | 40.0 | 41.03 |
| KRH44462 | Soybean | extracellular, vacuole | 39.25 | 40.36 |
| KRH26646 | Soybean | extracellular, plasma membrane, vacuole | 42.75 | 40.05 |
| KRH09724 | Soybean | extracellular, plasma membrane, vacuole | 38.5 | 39.9 |
| KRH20124 | Soybean | golgi, vacuole | 36.75 | 37.89 |
| KRH23581 | Soybean | extracellular, vacuole | 32.75 | 36.49 |
| KRH52523 | Soybean | extracellular, plasma membrane, vacuole | 30.75 | 35.55 |
| KRH03678 | Soybean | golgi, mitochondrion, plasma membrane, plastid, vacuole | 37.0 | 35.41 |
| KRH60849 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.25 | 34.2 |
| KRH51533 | Soybean | endoplasmic reticulum, extracellular, vacuole | 39.25 | 34.2 |
| KRH24481 | Soybean | cytosol | 29.75 | 33.06 |
| KRH14333 | Soybean | endoplasmic reticulum, extracellular | 37.75 | 32.75 |
| KRH73795 | Soybean | extracellular, vacuole | 38.5 | 32.63 |
| KRH20365 | Soybean | extracellular, vacuole | 31.75 | 32.48 |
| KRH01668 | Soybean | extracellular | 36.25 | 31.8 |
| KRH73361 | Soybean | extracellular, vacuole | 37.25 | 31.57 |
| KRH14776 | Soybean | extracellular, vacuole | 37.25 | 31.24 |
| KRH15221 | Soybean | extracellular | 37.25 | 30.79 |
| KRH60198 | Soybean | extracellular, plasma membrane, vacuole | 38.25 | 30.66 |
| KRH41480 | Soybean | extracellular, plasma membrane, vacuole | 37.5 | 30.12 |
| KRG89415 | Soybean | extracellular, vacuole | 26.5 | 29.53 |
| KRH46623 | Soybean | nucleus | 33.75 | 28.91 |
| KRG99621 | Soybean | nucleus | 33.25 | 28.48 |
| KRH17336 | Soybean | plasma membrane | 33.25 | 26.71 |
| KRH08471 | Soybean | extracellular | 32.5 | 26.21 |
| KRH70129 | Soybean | cytosol | 31.5 | 25.71 |
| KRH72984 | Soybean | vacuole | 32.0 | 25.35 |
| KRG97940 | Soybean | extracellular, plasma membrane, vacuole | 31.5 | 25.3 |
| KRH30935 | Soybean | extracellular, plasma membrane, vacuole | 31.5 | 25.3 |
| KRH51109 | Soybean | vacuole | 32.75 | 25.05 |
| KRH41666 | Soybean | plasma membrane | 31.0 | 24.85 |
| KRH16072 | Soybean | extracellular, plasma membrane, vacuole | 31.0 | 24.75 |
| KRH05027 | Soybean | extracellular, plasma membrane, vacuole | 30.25 | 24.3 |
| KRH58918 | Soybean | endoplasmic reticulum | 29.25 | 23.59 |
| KRH42823 | Soybean | extracellular, plasma membrane, vacuole | 29.25 | 23.59 |
| KRH02051 | Soybean | mitochondrion, vacuole | 32.0 | 23.44 |
| KRH60366 | Soybean | extracellular | 31.25 | 21.66 |
| KRH11452 | Soybean | extracellular, vacuole | 17.75 | 21.13 |
Protein Annotations
| KEGG:00500+3.2.1.39 | EntrezGene:100791994 | Gene3D:3.20.20.80 | MapMan:50.3.2 | EMBL:ACUP02012206 | EnsemblPlantsGene:GLYMA_20G018200 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004553 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0005975 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016787 | GO:GO:0030246 | GO:GO:0030247 | GO:GO:0046658 | InterPro:Glyco_hydro_17 | InterPro:Glycoside_hydrolase_SF |
| UniProt:K7N0T3 | EnsemblPlants:KRG89350 | ProteinID:KRG89350 | ProteinID:KRG89350.1 | PFAM:PF00332 | PANTHER:PTHR32227 |
| PANTHER:PTHR32227:SF229 | SUPFAM:SSF51445 | TMHMM:TMhelix | UniParc:UPI000295AC39 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr20:+:1892820..1895626
Molecular Weight (calculated)
44328.7 Da
IEP (calculated)
4.993
GRAVY (calculated)
0.001
Length
400 amino acids
Sequence
(BLAST)
(BLAST)
001: MATFIRRIAI SYILVTLFFS SDIGFFGRVA SFGINYGQVA NNLPPPDKVL ELFSNLKVTK TRIYDTNPQI LTAFAKSNVE VIVTVENNML SQLNDPQQAL
101: QWVSGHIKPY LPDTKITGIQ VGNELYTNGD KTLIQYLVPA VVNIHNALVQ LGLDSNIHVS TPSSLEVLQE SYPPSAGSFK SEISGIMSQF LNFLATTKAP
201: FWINAYPYFA YKDDPNRIPL DYVLFNPNEG MVDPYTNLHY DNMLYAQVDA VSFAIAKLGF SGIEVRVSET GWPSQGDPNE IGASVQNAQT YNRNLLRRQM
301: ANEGTPFSPR MRLEAYIFAL FNEDMKSGAT SERNYGLFQP DETMAYNVGL AAFADSSTSS TSISLTSSAT KIKAASNGFQ SLFFFWMFVC LLTSALCGFV
101: QWVSGHIKPY LPDTKITGIQ VGNELYTNGD KTLIQYLVPA VVNIHNALVQ LGLDSNIHVS TPSSLEVLQE SYPPSAGSFK SEISGIMSQF LNFLATTKAP
201: FWINAYPYFA YKDDPNRIPL DYVLFNPNEG MVDPYTNLHY DNMLYAQVDA VSFAIAKLGF SGIEVRVSET GWPSQGDPNE IGASVQNAQT YNRNLLRRQM
301: ANEGTPFSPR MRLEAYIFAL FNEDMKSGAT SERNYGLFQP DETMAYNVGL AAFADSSTSS TSISLTSSAT KIKAASNGFQ SLFFFWMFVC LLTSALCGFV
001: MSNMFSRIAM TNSIVLLLFS LTFLEHGLLF QRVSSLGINY GQVGDNLPPP DKVLQLLSSL HINKTRIYDT NPRVLTSFAN SNIELFVTVE NEMLPSLVDP
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
101: QQALQWVTTR IKPYFPATKI GGIAVGNELY TDDDSSLIGY LMPAMMSIHG ALVQTGLDKY IQVSTPNSLS VLQESYPPSA GCFRPEVAGV MTQLLGFLRN
201: TNSPFWINAY PYFAYKDSPT KIPLDYVLFN PNPGMVDPYT KYRYDNMLYA QVDAVIFAMA RLGFKDIEVG VSETGWPSKG DGDEVGATVA NAAVYNKNIL
301: RRQLQNEGTP LRPNLSFDVY LFALFNEDLK PGPTSERNYG LYQPDETMTY NVGLLSSSSL TSTSTTSSTS IISLTSSAST ALKKGKQRLM YWTCVYLLAI
401: HMLIRRSY
Arabidopsis Description
Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4I4R0]
SUBAcon: [vacuole]
SUBAcon: [vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.