CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

plastid 2
mitochondrion 3
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH20124	Soybean	golgi, vacuole	87.56	94.33
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	66.27	70.3
CDX83243	Canola	vacuole	62.44	69.05
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	61.96	68.52
CDY38531	Canola	golgi, vacuole	62.2	68.06
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	62.2	67.01
PGSC0003DMT400079432	Potato	extracellular, vacuole	61.72	66.15
Solyc07g008150.2.1	Tomato	extracellular, vacuole	60.77	65.13
GSMUA_AchrUn_...	Banana	cytosol	44.5	62.63
KRH09724	Soybean	extracellular, plasma membrane, vacuole	56.22	60.88
KRH23581	Soybean	extracellular, vacuole	50.96	59.33
KRH47445	Soybean	extracellular, vacuole	54.55	58.46
EER88625	Sorghum	extracellular, plasma membrane, vacuole	54.55	58.16
KRH44462	Soybean	extracellular, vacuole	53.35	57.33
Zm00001d046534_P001	Maize	plasma membrane	53.83	57.11
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	45.22	56.42
TraesCS7A01G378100.1	Wheat	golgi, vacuole	52.87	55.39
TraesCS7B01G279900.1	Wheat	golgi, vacuole	51.2	53.63
HORVU0Hr1G021950.4	Barley	golgi, vacuole	50.96	53.25
Os06t0607000-01	Rice	plasma membrane	56.46	48.96
TraesCS7D01G374900.1	Wheat	plastid, vacuole	51.44	48.64
KRH22675	Soybean	vacuole	37.8	40.31
KRH25239	Soybean	extracellular, plasma membrane, vacuole	36.6	39.03
KRH30421	Soybean	extracellular, plasma membrane, vacuole	36.36	38.68
KRH34248	Soybean	extracellular, plasma membrane, vacuole	37.8	38.16
KRG89350	Soybean	extracellular, vacuole	35.41	37.0
KRH11184	Soybean	endoplasmic reticulum, extracellular, vacuole	34.45	36.18
KRH21069	Soybean	vacuole	34.45	36.09
KRH26646	Soybean	extracellular, plasma membrane, vacuole	36.84	36.07
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	44.02	35.87
KRH50394	Soybean	extracellular, vacuole	34.69	33.33
KRH52523	Soybean	extracellular, plasma membrane, vacuole	27.27	32.95
KRH24481	Soybean	cytosol	27.51	31.94
KRH14333	Soybean	endoplasmic reticulum, extracellular	34.93	31.67
KRH73361	Soybean	extracellular, vacuole	35.17	31.14
KRH14776	Soybean	extracellular, vacuole	35.17	30.82
KRH73795	Soybean	extracellular, vacuole	34.21	30.3
KRH60849	Soybean	endoplasmic reticulum, extracellular, vacuole	33.25	30.28
KRH51533	Soybean	endoplasmic reticulum, extracellular, vacuole	33.25	30.28
KRH20365	Soybean	extracellular, vacuole	27.75	29.67
KRH08471	Soybean	extracellular	34.21	28.83
KRH70129	Soybean	cytosol	33.73	28.78
KRH60198	Soybean	extracellular, plasma membrane, vacuole	33.73	28.26
KRH41480	Soybean	extracellular, plasma membrane, vacuole	33.49	28.11
KRH41666	Soybean	plasma membrane	32.54	27.25
KRH15221	Soybean	extracellular	31.34	27.07
KRH72984	Soybean	vacuole	32.3	26.73
KRG99621	Soybean	nucleus	29.67	26.55
KRH17336	Soybean	plasma membrane	31.34	26.31
KRG97940	Soybean	extracellular, plasma membrane, vacuole	30.86	25.9
KRH30935	Soybean	extracellular, plasma membrane, vacuole	30.62	25.7
KRH46623	Soybean	nucleus	28.71	25.7
KRH01668	Soybean	extracellular	27.99	25.66
KRH42823	Soybean	extracellular, plasma membrane, vacuole	29.43	24.8
KRH05027	Soybean	extracellular, plasma membrane, vacuole	29.43	24.7
KRH58918	Soybean	endoplasmic reticulum	29.19	24.6
KRH16072	Soybean	extracellular, plasma membrane, vacuole	29.43	24.55
KRH51109	Soybean	vacuole	30.14	24.09
KRH02051	Soybean	mitochondrion, vacuole	31.34	23.99
KRG89415	Soybean	extracellular, vacuole	20.57	23.96
KRH60366	Soybean	extracellular	32.06	23.22
KRH11452	Soybean	extracellular, vacuole	18.18	22.62

Protein Annotations

KEGG:00500+3.2.1.39	Gene3D:3.20.20.80	MapMan:50.3.2	EMBL:ACUP02010356	EnsemblPlantsGene:GLYMA_17G113200	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005488	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0005975	GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0030246	GO:GO:0030247	GO:GO:0046658	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	UniProt:I1MU75
EnsemblPlants:KRH03678	ProteinID:KRH03678	ProteinID:KRH03678.1	PFAM:PF00332	PANTHER:PTHR32227	PANTHER:PTHR32227:SF47
SUPFAM:SSF51445	TMHMM:TMhelix	UniParc:UPI00023D5BD9	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr17:-:8928093..8932122

Molecular Weight (calculated)

46757.6 Da

IEP (calculated)

7.997

GRAVY (calculated)

-0.177

Length

418 amino acids

Sequence
(BLAST)

001: MACLRRKKHC VQGQQRVSFS NFDHPRQSNM YLILRFFCPF SILFFTPIAS VQAFTGTYGI NYGRIANNIP SPDEVVTLLR AEKIRNVRIY DADHSVLKAF
101: SGTGLEIVVG LPNGQLQDMS SNPDHALNWV KENVQSFLPD TRIRGIAVGN EVLGGGDYSL WGVLLGAVKN IYNATVKLHL DQLVQISTAN SFAVFSQSYP
201: PSSGKFDDNV NQFMKPLLEF FQQIGSPFCV NAYPFLVYAS DPEHIDINYA LFEPTKGIYD PTYRLHYDNM LDAQIDAAYA ALEDAGFDKM EVIITETGWA
301: SNGDQTEAGA NATNARTYNY NLRRRLAKRK GTPHRPKNVV KAYIFALFNE NEKPGHSSEK NYGLFKADGS ISYDIGFHGL NAGHSSLLSL KNINTQGLSR
401: SYAMVFFLSS LILLIFWS

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.