Factsheet for Zm00001d046534_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 6
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

plasma membrane: 27341663

msms PMID: 27341663 doi

P Voothuluru, JC Anderson, RE Sharp, SC Peck

Bond Life Sciences Center, University of Missouri, Columbia, MO, 65211, USA., Division of Biochemistry, University of Missouri, Columbia, MO, 65211, USA., Division of Plant Sciences, University of Missouri, Columbia, MO, 65211, USA., Interdisciplinary Plant Group, University of Missouri, Columbia, MO, 65211, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88625	Sorghum	extracellular, plasma membrane, vacuole	93.15	93.62
TraesCS7A01G378100.1	Wheat	golgi, vacuole	74.37	73.43
TraesCS7B01G279900.1	Wheat	golgi, vacuole	74.11	73.18
HORVU0Hr1G021950.4	Barley	golgi, vacuole	73.6	72.5
Os06t0607000-01	Rice	plasma membrane	81.73	66.81
TraesCS7D01G374900.1	Wheat	plastid, vacuole	74.37	66.29
Zm00001d015783_P001	Maize	golgi, plasma membrane, vacuole	67.77	63.88
GSMUA_AchrUn_...	Banana	cytosol	47.72	63.3
KRH20124	Soybean	golgi, vacuole	58.12	59.02
GSMUA_Achr7P13110_001	Banana	golgi, vacuole	49.75	58.51
PGSC0003DMT400079432	Potato	extracellular, vacuole	55.84	56.41
CDY38531	Canola	golgi, vacuole	54.57	56.28
CDX83243	Canola	vacuole	53.81	56.08
Solyc07g008150.2.1	Tomato	extracellular, vacuole	55.33	55.9
Bra000536.1-P	Field mustard	golgi, plasma membrane, vacuole	53.55	55.82
AT2G26600.1	Thale cress	endoplasmic reticulum, golgi, vacuole	54.82	55.67
VIT_11s0016g05560.t01	Wine grape	golgi, vacuole	54.82	54.82
KRH03678	Soybean	golgi, mitochondrion, plasma membrane, plastid, vacuole	57.11	53.83
Zm00001d028410_P001	Maize	vacuole	35.53	38.78
Zm00001d010137_P001	Maize	extracellular	39.85	38.77
Zm00001d003784_P001	Maize	endoplasmic reticulum, extracellular, vacuole	38.07	37.97
Zm00001d046134_P001	Maize	endoplasmic reticulum, extracellular, plasma membrane	39.09	37.84
Zm00001d042767_P001	Maize	plasma membrane	39.59	37.68
Zm00001d000117_P001	Maize	plastid, vacuole	37.31	37.03
Zm00001d012292_P001	Maize	mitochondrion	39.09	36.15
Zm00001d030361_P001	Maize	plasma membrane	37.06	36.14
Zm00001d036051_P001	Maize	extracellular, vacuole	38.32	35.45
GSMUA_Achr5P05970_001	Banana	plasma membrane, plastid, vacuole	45.94	35.28
Zm00001d018214_P001	Maize	extracellular	41.37	33.4
Zm00001d013390_P001	Maize	extracellular	34.52	30.77
Zm00001d013573_P001	Maize	extracellular, plasma membrane, vacuole	35.53	30.24
Zm00001d001791_P001	Maize	endoplasmic reticulum, extracellular, vacuole	32.74	28.67
Zm00001d043524_P001	Maize	plasma membrane	36.04	28.63
Zm00001d004768_P001	Maize	extracellular	31.98	27.75
Zm00001d031571_P001	Maize	extracellular	33.5	27.39
Zm00001d021024_P001	Maize	extracellular	31.98	26.3
Zm00001d028331_P001	Maize	plastid	34.26	25.96
Zm00001d004763_P001	Maize	extracellular	30.96	25.85
Zm00001d048055_P001	Maize	plasma membrane	32.49	25.55
Zm00001d028243_P001	Maize	plasma membrane	32.23	25.3
Zm00001d019248_P001	Maize	extracellular, vacuole	31.22	24.7
Zm00001d006658_P005	Maize	extracellular, plasma membrane, vacuole	30.46	24.39
Zm00001d021903_P001	Maize	extracellular, plasma membrane, vacuole	30.46	24.0
Zm00001d021690_P001	Maize	extracellular	34.26	23.12
Zm00001d006538_P001	Maize	vacuole	35.53	21.57
Zm00001d021695_P001	Maize	extracellular	33.5	20.4
Zm00001d021697_P001	Maize	extracellular	34.01	19.28
Zm00001d021598_P005	Maize	plasma membrane	28.68	17.17

Protein Annotations

KEGG:00500+3.2.1.39	EntrezGene:100192039	Gene3D:3.20.20.80	MapMan:50.3.2	ProteinID:AQL04458.1	UniProt:B4FB31
EMBL:BT034319	GO:GO:0003674	GO:GO:0003824	GO:GO:0004553	GO:GO:0005975	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	InterPro:Glyco_hydro_17	InterPro:Glycoside_hydrolase_SF	PFAM:PF00332	PANTHER:PTHR32227
PANTHER:PTHR32227:SF47	SUPFAM:SSF51445	SignalP:SignalP-noTM	UniParc:UPI00017B68E4	EnsemblPlantsGene:Zm00001d046534	EnsemblPlants:Zm00001d046534_P001
EnsemblPlants:Zm00001d046534_T001	SEG:seg	:	:	:	:

Description

Glycosyl hydrolase superfamily protein

Coordinates

chr9:+:94413654..94418069

Molecular Weight (calculated)

43668.5 Da

IEP (calculated)

7.302

GRAVY (calculated)

-0.034

Length

394 amino acids

Sequence
(BLAST)

001: MVPQMVLLLC CCLLAFPPHG PLVVEAFVGG YGVNYGRIAN NIPSPDKVVE LLRRAKIRNV KIYDSDHSVL DAFKGSGINL VIAIPNELVK DMAANTSRSM
101: DWLNQNVQPY LPQTRIVGIT VGNEVLGGQD QSLYQPLVDA VKNVYDGLKR LHLERKIELF TPHSEAVFAT SYPPSACVFK EELMPYMKPL LDFFAMIGSP
201: FYVNAYPFLA YISDPEHIDI NYALFKPNKG IIDPNNSLHY DNMFDAQVDA AYAALHAAGY DNMEVRVAET GWASSGDQNE AGASSENART YNFNLRKRLF
301: LRTGTPLKPK RPVKAYIFAL FNENQKPGAG SERHYGLFLP DGRISYDIGV SGLLPSSASS SVLSIKNVQA GGWILQHWAT VLLCSFHFLR AIVT

Best Arabidopsis Sequence Match ( AT2G26600.1 )
(BLAST)

001: MRSSKLLLLK FFFFFFFNLT SLEYQVDGAF VGTYGINYGR IADNIPSPEK VVLLLKQAKI RNVRIYDVDH TVLEAFSGTG LDLVVGLPNG FLKEMSSNAD
101: HAFSWVKENI QSFLPKTRIR GIAIGNEVLG GGDSELAGAL LGAAKNVYNA LKKMNLEDTV QITTAHSQAV FSDSYPPSSC VFKENVVQFM KPLLEFFQQI
201: GSPFCLNAYP FLAYTYNPKE IDINYALFKP TEGIYDPKTD LHYDNMLDAQ IDAAYMALQD AGFKKMEVMI TETGWASKGD SDEPAATPEN ARTYNYNLRK
301: RLAKKKGTPL RPKTVLKAYI FALFNENSKP GKSSETHFGL FKPDGTISYD IGFNNLKSDS PKSLISSSKS ARYYVALVIS VSAFLLMI

Arabidopsis Description

Glycosyl hydrolase superfamily protein [Source:UniProtKB/TrEMBL;Acc:O48727]
SUBAcon: [endoplasmic reticulum,golgi,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.